STRINGSTRING
T551_00303 T551_00303 T551_02704 T551_02704 T551_02284 T551_02284 T551_01863 T551_01863 T551_00929 T551_00929 T551_00760 T551_00760 T551_00847 T551_00847 T551_00443 T551_00443
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
T551_00303Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (187 aa)
T551_02704Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. (393 aa)
T551_02284Uncharacterized protein. (281 aa)
T551_01863Uncharacterized protein. (314 aa)
T551_00929Ubiquitin-40S ribosomal protein S27a. (153 aa)
T551_00760Abhydrolase_2 domain-containing protein. (251 aa)
T551_00847Polyubiquitin. (181 aa)
T551_00443Abhydrolase_2 domain-containing protein. (298 aa)
Your Current Organism:
Pneumocystis jirovecii RU7
NCBI taxonomy Id: 1408657
Other names: P. jirovecii RU7
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