(7 nodes) Phosphosugar isomerase, KdsD/KpsF-type, and Lipopolysaccharide biosynthesis network (Serratia ficaria)

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second shell of interactors

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proteins of unknown 3D structure

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gene neighborhood

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Your Input:
	gutQ	Unannotated protein. (323 aa)
	kdsC	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (184 aa)
	kdsD	Unannotated protein. (328 aa)
	kdsB	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (249 aa)
	lpxK	Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (326 aa)
	kdsA	Unannotated protein; Belongs to the KdsA family. (284 aa)
	waaA	Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (425 aa)

Your Current Organism:

Serratia ficaria

NCBI taxonomy Id: 1411141
Other names: S. ficaria NBRC 102596, Serratia ficaria NBRC 102596

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gutQ	kdsA	GCA_001590885_01938	GCA_001590885_03678	Unannotated protein.	Unannotated protein; Belongs to the KdsA family.	0.893
gutQ	kdsB	GCA_001590885_01938	GCA_001590885_02993	Unannotated protein.	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.880
gutQ	kdsC	GCA_001590885_01938	GCA_001590885_02279	Unannotated protein.	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.	0.889
gutQ	lpxK	GCA_001590885_01938	GCA_001590885_03001	Unannotated protein.	Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.871
gutQ	waaA	GCA_001590885_01938	GCA_001590885_04024	Unannotated protein.	Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.	0.826
kdsA	gutQ	GCA_001590885_03678	GCA_001590885_01938	Unannotated protein; Belongs to the KdsA family.	Unannotated protein.	0.893
kdsA	kdsB	GCA_001590885_03678	GCA_001590885_02993	Unannotated protein; Belongs to the KdsA family.	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.858
kdsA	kdsC	GCA_001590885_03678	GCA_001590885_02279	Unannotated protein; Belongs to the KdsA family.	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.	0.989
kdsA	kdsD	GCA_001590885_03678	GCA_001590885_02280	Unannotated protein; Belongs to the KdsA family.	Unannotated protein.	0.988
kdsA	lpxK	GCA_001590885_03678	GCA_001590885_03001	Unannotated protein; Belongs to the KdsA family.	Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.850
kdsA	waaA	GCA_001590885_03678	GCA_001590885_04024	Unannotated protein; Belongs to the KdsA family.	Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.	0.848
kdsB	gutQ	GCA_001590885_02993	GCA_001590885_01938	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Unannotated protein.	0.880
kdsB	kdsA	GCA_001590885_02993	GCA_001590885_03678	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Unannotated protein; Belongs to the KdsA family.	0.858
kdsB	kdsC	GCA_001590885_02993	GCA_001590885_02279	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.	0.978
kdsB	kdsD	GCA_001590885_02993	GCA_001590885_02280	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Unannotated protein.	0.881
kdsB	lpxK	GCA_001590885_02993	GCA_001590885_03001	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Unannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).	0.859
kdsB	waaA	GCA_001590885_02993	GCA_001590885_04024	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	Unannotated protein; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.	0.984
kdsC	gutQ	GCA_001590885_02279	GCA_001590885_01938	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.	Unannotated protein.	0.889
kdsC	kdsA	GCA_001590885_02279	GCA_001590885_03678	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.	Unannotated protein; Belongs to the KdsA family.	0.989
kdsC	kdsB	GCA_001590885_02279	GCA_001590885_02993	Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.	Unannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.	0.978