STRINGSTRING
cynR_5 cynR_5 cmpR cmpR GCA_001590885_02543 GCA_001590885_02543 hcaR_3 hcaR_3 yofA_1 yofA_1 dmlR_29 dmlR_29
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cynR_5Unannotated protein; Belongs to the LysR transcriptional regulatory family. (290 aa)
cmpRUnannotated protein; Belongs to the LysR transcriptional regulatory family. (307 aa)
GCA_001590885_02543Unannotated protein. (294 aa)
hcaR_3Unannotated protein; Belongs to the LysR transcriptional regulatory family. (290 aa)
yofA_1Unannotated protein; Belongs to the LysR transcriptional regulatory family. (289 aa)
dmlR_29Unannotated protein; Belongs to the LysR transcriptional regulatory family. (298 aa)
Your Current Organism:
Serratia ficaria
NCBI taxonomy Id: 1411141
Other names: S. ficaria NBRC 102596, Serratia ficaria NBRC 102596
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.