STRINGSTRING
KXG42975.1 KXG42975.1 KXG43839.1 KXG43839.1 U473_08925 U473_08925 KXG44161.1 KXG44161.1 KXG44238.1 KXG44238.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KXG42975.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family. (105 aa)
KXG43839.1Thioredoxin peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
U473_08925GTP pyrophosphokinase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (87 aa)
KXG44161.1ferredoxin--NADP(+) reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
KXG44238.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (190 aa)
Your Current Organism:
Tepidibacillus decaturensis
NCBI taxonomy Id: 1413211
Other names: ATCC BAA-2644, DSM 103037, T. decaturensis, Tepidibacillus decaturensis Dong et al. 2016, Tepidibacillus sp. Z9, Tepidibacillus sp. Z9_1, Tepidibacillus sp. Z9_2, strain Z9
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