(6 nodes) Mixed, incl. Acetyltransferase complex, and NAD+ nucleosidase activity network (Streptomyces sp. NRRLB1140)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KOX00196.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
	KOV99853.1	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (658 aa)
	KOV97826.1	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (562 aa)
	KOV97529.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (791 aa)
	KOV95867.1	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
	KOV93489.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)

Your Current Organism:

Streptomyces sp. NRRLB1140

NCBI taxonomy Id: 1415549
Other names: S. sp. NRRL B-1140, Streptomyces sp. NRRL B-1140

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KOV93489.1	KOV95867.1	ADK65_32715	ADK65_28980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KOV93489.1	KOV97529.1	ADK65_32715	ADK65_25095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KOV93489.1	KOV97826.1	ADK65_32715	ADK65_24550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
KOV93489.1	KOV99853.1	ADK65_32715	ADK65_17160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KOV93489.1	KOX00196.1	ADK65_32715	ADK65_15765	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KOV95867.1	KOV93489.1	ADK65_28980	ADK65_32715	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KOV95867.1	KOV97529.1	ADK65_28980	ADK65_25095	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
KOV95867.1	KOX00196.1	ADK65_28980	ADK65_15765	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
KOV97529.1	KOV93489.1	ADK65_25095	ADK65_32715	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
KOV97529.1	KOV95867.1	ADK65_25095	ADK65_28980	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.860
KOV97529.1	KOV97826.1	ADK65_25095	ADK65_24550	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
KOV97529.1	KOV99853.1	ADK65_25095	ADK65_17160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KOV97826.1	KOV93489.1	ADK65_24550	ADK65_32715	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
KOV97826.1	KOV97529.1	ADK65_24550	ADK65_25095	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
KOV97826.1	KOV99853.1	ADK65_24550	ADK65_17160	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KOV97826.1	KOX00196.1	ADK65_24550	ADK65_15765	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.713
KOV99853.1	KOV93489.1	ADK65_17160	ADK65_32715	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.953
KOV99853.1	KOV97529.1	ADK65_17160	ADK65_25095	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KOV99853.1	KOV97826.1	ADK65_17160	ADK65_24550	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
KOV99853.1	KOX00196.1	ADK65_17160	ADK65_15765	ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876