STRINGSTRING
KOX00361.1 KOX00361.1 KOV97883.1 KOV97883.1 KOV97908.1 KOV97908.1 KOV97816.1 KOV97816.1 ligB ligB KOV92584.1 KOV92584.1 KOV92586.1 KOV92586.1 KOX01456.1 KOX01456.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KOX00361.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
KOV97883.13'-phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
KOV97908.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
KOV97816.12'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (190 aa)
ligBATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (512 aa)
KOV92584.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
KOV92586.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
KOX01456.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
Your Current Organism:
Streptomyces sp. NRRLB1140
NCBI taxonomy Id: 1415549
Other names: S. sp. NRRL B-1140, Streptomyces sp. NRRL B-1140
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