(17 nodes) Defense response to other organism network (Streptomyces sp. NRRLB1140)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KOX04386.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
	KOX04388.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1184 aa)
	KOX04466.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
	KOX04490.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	KOX03844.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
	KOX03311.1	Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
	KOX03388.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
	KOX01020.1	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa)
	KOX00618.1	Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)
	KOX00765.1	DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1090 aa)
	KOV97288.1	Glycoside hydrolase family 78; Derived by automated computational analysis using gene prediction method: Protein Homology. (1091 aa)
	KOV95827.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
	KOV94528.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1189 aa)
	KOV92583.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa)
	KOV92731.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1224 aa)
	KOV91599.1	Restriction endonuclease subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1030 aa)
	KOV91740.1	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (790 aa)

Your Current Organism:

Streptomyces sp. NRRLB1140

NCBI taxonomy Id: 1415549
Other names: S. sp. NRRL B-1140, Streptomyces sp. NRRL B-1140

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KOV91740.1	KOV92583.1	ADK65_35145	ADK65_33770	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV91740.1	KOV92731.1	ADK65_35145	ADK65_34405	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV91740.1	KOX04388.1	ADK65_35145	ADK65_04395	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92583.1	KOV91740.1	ADK65_33770	ADK65_35145	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92583.1	KOV92731.1	ADK65_33770	ADK65_34405	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
KOV92583.1	KOV97288.1	ADK65_33770	ADK65_26080	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycoside hydrolase family 78; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92583.1	KOX01020.1	ADK65_33770	ADK65_11770	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92583.1	KOX03844.1	ADK65_33770	ADK65_06675	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92583.1	KOX04386.1	ADK65_33770	ADK65_04380	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.630
KOV92583.1	KOX04388.1	ADK65_33770	ADK65_04395	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
KOV92583.1	KOX04466.1	ADK65_33770	ADK65_04890	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92731.1	KOV91740.1	ADK65_34405	ADK65_35145	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92731.1	KOV92583.1	ADK65_34405	ADK65_33770	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.926
KOV92731.1	KOV97288.1	ADK65_34405	ADK65_26080	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycoside hydrolase family 78; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92731.1	KOX01020.1	ADK65_34405	ADK65_11770	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Galactose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92731.1	KOX03844.1	ADK65_34405	ADK65_06675	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV92731.1	KOX04386.1	ADK65_34405	ADK65_04380	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.549
KOV92731.1	KOX04388.1	ADK65_34405	ADK65_04395	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KOV92731.1	KOX04466.1	ADK65_34405	ADK65_04890	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
KOV97288.1	KOV92583.1	ADK65_26080	ADK65_33770	Glycoside hydrolase family 78; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490