Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOV90908.1 | KOV98710.1 | ADK65_36095 | ADK65_20435 | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
| KOV90908.1 | KOX00589.1 | ADK65_36095 | ADK65_12975 | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.450 |
| KOV93722.1 | KOV96301.1 | ADK65_31910 | ADK65_28550 | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
| KOV93722.1 | KOV98710.1 | ADK65_31910 | ADK65_20435 | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
| KOV93722.1 | KOX00585.1 | ADK65_31910 | ADK65_12955 | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.981 |
| KOV93722.1 | KOX00589.1 | ADK65_31910 | ADK65_12975 | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.427 |
| KOV93722.1 | KOX01161.1 | ADK65_31910 | ADK65_10695 | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Similar to DNA polymerase I; lacks 5'-3' exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.572 |
| KOV93722.1 | polA | ADK65_31910 | ADK65_18405 | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.920 |
| KOV95833.1 | KOX00603.1 | ADK65_29370 | ADK65_13085 | Phosphopantetheine--protein transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.501 |
| KOV96301.1 | KOV93722.1 | ADK65_28550 | ADK65_31910 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
| KOV96301.1 | KOX01148.1 | ADK65_28550 | ADK65_10600 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.942 |
| KOV96301.1 | KOX01161.1 | ADK65_28550 | ADK65_10695 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Similar to DNA polymerase I; lacks 5'-3' exonuclease domain; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.867 |
| KOV96301.1 | ligB | ADK65_28550 | ADK65_30930 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.948 |
| KOV96301.1 | polA | ADK65_28550 | ADK65_18405 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.880 |
| KOV96301.1 | rnhA | ADK65_28550 | ADK65_02095 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.579 |
| KOV96301.1 | rnhB | ADK65_28550 | ADK65_17110 | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.532 |
| KOV97504.1 | KOX00603.1 | ADK65_25565 | ADK65_13085 | Phosphopantetheine--protein transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.505 |
| KOV97571.1 | KOX00476.1 | ADK65_25290 | ADK65_12185 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit gamma/tau; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.822 |
| KOV97571.1 | KOX02546.1 | ADK65_25290 | ADK65_08060 | MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.720 |
| KOV98034.1 | polA | ADK65_23300 | ADK65_18405 | Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.514 |
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