11 items (Pseudogymnoascus sp. VKMF4246) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V492_02804	Uncharacterized protein. (644 aa)
	V492_01046	Uncharacterized protein. (148 aa)
	V492_01139	Uncharacterized protein. (1382 aa)
	V492_01998	Uncharacterized protein. (312 aa)
	V492_03014	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (507 aa)
	V492_00964	Uncharacterized protein. (1443 aa)
	V492_02962	Uncharacterized protein. (190 aa)
	V492_08497	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	V492_05936	Uncharacterized protein. (504 aa)
	V492_07148	Uncharacterized protein. (1283 aa)
	V492_07519	Uncharacterized protein. (174 aa)

Your Current Organism:

Pseudogymnoascus sp. VKMF4246

NCBI taxonomy Id: 1420902
Other names: P. sp. VKM F-4246, Pseudogymnoascus sp. VKM F-4246

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V492_01046	V492_01139	A0A094C2N9	A0A094A0C7	Uncharacterized protein.	Uncharacterized protein.	0.638
V492_01046	V492_01998	A0A094C2N9	A0A093ZWM9	Uncharacterized protein.	Uncharacterized protein.	0.803
V492_01046	V492_02804	A0A094C2N9	A0A093Z9Z4	Uncharacterized protein.	Uncharacterized protein.	0.567
V492_01046	V492_02962	A0A094C2N9	A0A093ZA33	Uncharacterized protein.	Uncharacterized protein.	0.848
V492_01046	V492_07519	A0A094C2N9	A0A093YQ84	Uncharacterized protein.	Uncharacterized protein.	0.762
V492_01046	V492_08497	A0A094C2N9	A0A093Z310	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.894
V492_01139	V492_01046	A0A094A0C7	A0A094C2N9	Uncharacterized protein.	Uncharacterized protein.	0.638
V492_01139	V492_01998	A0A094A0C7	A0A093ZWM9	Uncharacterized protein.	Uncharacterized protein.	0.638
V492_01139	V492_02962	A0A094A0C7	A0A093ZA33	Uncharacterized protein.	Uncharacterized protein.	0.638
V492_01139	V492_07148	A0A094A0C7	A0A093YXK5	Uncharacterized protein.	Uncharacterized protein.	0.487
V492_01139	V492_07519	A0A094A0C7	A0A093YQ84	Uncharacterized protein.	Uncharacterized protein.	0.638
V492_01139	V492_08497	A0A094A0C7	A0A093Z310	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.638
V492_01998	V492_01046	A0A093ZWM9	A0A094C2N9	Uncharacterized protein.	Uncharacterized protein.	0.803
V492_01998	V492_01139	A0A093ZWM9	A0A094A0C7	Uncharacterized protein.	Uncharacterized protein.	0.638
V492_01998	V492_02804	A0A093ZWM9	A0A093Z9Z4	Uncharacterized protein.	Uncharacterized protein.	0.501
V492_01998	V492_07519	A0A093ZWM9	A0A093YQ84	Uncharacterized protein.	Uncharacterized protein.	0.445
V492_01998	V492_08497	A0A093ZWM9	A0A093Z310	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.847
V492_02804	V492_01046	A0A093Z9Z4	A0A094C2N9	Uncharacterized protein.	Uncharacterized protein.	0.567
V492_02804	V492_01998	A0A093Z9Z4	A0A093ZWM9	Uncharacterized protein.	Uncharacterized protein.	0.501
V492_02804	V492_02962	A0A093Z9Z4	A0A093ZA33	Uncharacterized protein.	Uncharacterized protein.	0.443