STRINGSTRING
ompR-2 ompR-2 pleC pleC walK walK phoR phoR phoB phoB AHI30622.1 AHI30622.1 barA barA rstA rstA rstB rstB phoP-3 phoP-3 phoP-4 phoP-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ompR-2Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
pleCHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (639 aa)
walKHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
phoRHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
phoBChemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
AHI30622.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)
barAHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (942 aa)
rstAResponse regulator in two-component regulatory system with RstB; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
rstBHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
phoP-3Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
phoP-4PhoB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
Your Current Organism:
Marinobacter salarius
NCBI taxonomy Id: 1420917
Other names: CIP 110588, JCM 19399, KMM 7502, LMG 27497, LMG:27497, M. salarius, Marinobacter salarius Ng et al. 2015, Marinobacter sp. JCM 19399, Marinobacter sp. R9SW1, strain R9SW1
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