STRINGSTRING
SHL88993.1 SHL88993.1 SHL89043.1 SHL89043.1 SHL91114.1 SHL91114.1 SHL93363.1 SHL93363.1 SHL93967.1 SHL93967.1 SHL94052.1 SHL94052.1 SHK78546.1 SHK78546.1 tdk tdk surE surE tadA tadA pyrD pyrD tgt tgt SHK87882.1 SHK87882.1 SHK87947.1 SHK87947.1 SHK88003.1 SHK88003.1 SHL03319.1 SHL03319.1 SHL06509.1 SHL06509.1 SHL09887.1 SHL09887.1 ndk ndk SHL13724.1 SHL13724.1 cmk cmk pyrH pyrH SHL16486.1 SHL16486.1 pyrB pyrB carA carA carB carB SHL23256.1 SHL23256.1 SHL23871.1 SHL23871.1 SHL34686.1 SHL34686.1 SHL36707.1 SHL36707.1 SHL36740.1 SHL36740.1 thyA thyA SHL54531.1 SHL54531.1 SHL62910.1 SHL62910.1 SHL63036.1 SHL63036.1 SHL65545.1 SHL65545.1 SHL61984.1 SHL61984.1 SHL62550.1 SHL62550.1 groS groS pyrG pyrG SHL77348.1 SHL77348.1 SHL77720.1 SHL77720.1 SHL86395.1 SHL86395.1 SHL87723.1 SHL87723.1 SHL99888.1 SHL99888.1 SHM01615.1 SHM01615.1 SHM01643.1 SHM01643.1 SHM15863.1 SHM15863.1 pyrE pyrE SHM23057.1 SHM23057.1 SHM35259.1 SHM35259.1 SHM39665.1 SHM39665.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHL88993.1Ribonucleoside-diphosphate reductase alpha chain. (552 aa)
SHL89043.1Ribonucleoside-diphosphate reductase beta chain. (324 aa)
SHL91114.1SH3 domain-containing protein. (139 aa)
SHL93363.1Cytidine deaminase. (160 aa)
SHL93967.1Cytosine/adenosine deaminase. (444 aa)
SHL94052.1Cytosine/adenosine deaminase. (412 aa)
SHK78546.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (249 aa)
tdkThymidine kinase. (195 aa)
surE5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (262 aa)
tadAtRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (143 aa)
pyrDDihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (345 aa)
tgttRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...] (376 aa)
SHK87882.1Hypothetical protein. (399 aa)
SHK87947.1Hypothetical protein. (740 aa)
SHK88003.1Hypothetical protein; Belongs to the LOG family. (250 aa)
SHL03319.1Maltose/moltooligosaccharide transporter. (460 aa)
SHL06509.1Type I restriction enzyme R protein N terminus (HSDR_N). (143 aa)
SHL09887.1Sugar (Glycoside-Pentoside-Hexuronide) transporter. (481 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (138 aa)
SHL13724.1Uridine phosphorylase. (284 aa)
cmkCytidylate kinase. (224 aa)
pyrHUridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. (235 aa)
SHL16486.1Nicotinamidase-related amidase. (214 aa)
pyrBAspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (296 aa)
carACarbamoyl-phosphate synthase small subunit; Belongs to the CarA family. (357 aa)
carBCarbamoyl-phosphate synthase large subunit; Belongs to the CarB family. (1060 aa)
SHL23256.1Deoxyadenosine/deoxycytidine kinase. (204 aa)
SHL23871.1Hypothetical protein. (251 aa)
SHL34686.1Putative hydrolases of HD superfamily. (196 aa)
SHL36707.1Isochorismatase family protein. (59 aa)
SHL36740.1Isochorismatase family protein. (136 aa)
thyAThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (264 aa)
SHL54531.1Protein of unknown function. (173 aa)
SHL62910.1MFS transporter, NHS family, xanthosine permease. (460 aa)
SHL63036.1MFS transporter, UMF1 family. (496 aa)
SHL65545.1S1/P1 Nuclease. (263 aa)
SHL61984.1Hypothetical protein. (275 aa)
SHL62550.1Uridine kinase. (204 aa)
groSChaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. (92 aa)
pyrGCTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (536 aa)
SHL77348.1Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (271 aa)
SHL77720.1Cytidine deaminase. (131 aa)
SHL86395.1Uracil phosphoribosyltransferase. (216 aa)
SHL87723.1Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family. (183 aa)
SHL99888.1Purine-nucleoside phosphorylase. (236 aa)
SHM01615.15'-nucleotidase; Belongs to the 5'-nucleotidase family. (316 aa)
SHM01643.15'-nucleotidase, C-terminal domain. (252 aa)
SHM15863.15'(3')-deoxyribonucleotidase. (170 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (459 aa)
SHM23057.1Hypothetical protein; Belongs to the LOG family. (193 aa)
SHM35259.1Dihydroorotase. (445 aa)
SHM39665.1dCMP deaminase. (140 aa)
Your Current Organism:
Chryseobacterium contaminans
NCBI taxonomy Id: 1423959
Other names: C. contaminans, CCM 8492, Chryseobacterium sp. C-26, LMG 27810, LMG:27810, strain C-26, strain C26
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