STRINGSTRING
AOT70322.1 AOT70322.1 AOT70324.1 AOT70324.1 Gferi_19090 Gferi_19090 AOT71449.1 AOT71449.1 AOT71450.1 AOT71450.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOT70322.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (141 aa)
AOT70324.1PTS fructose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
Gferi_19090Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
AOT71449.1PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
AOT71450.1PTS sorbose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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