(16 nodes) Mixed, incl. ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein network (Geosporobacter ferrireducens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOT69149.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
	AOT69490.1	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AOT69491.1	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (344 aa)
	AOT69492.1	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (332 aa)
	AOT69493.1	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	AOT69846.1	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
	AOT73067.1	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (327 aa)
	AOT69847.1	Heme ABC transporter substrate-binding protein IsdE; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
	AOT69848.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (368 aa)
	AOT69850.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (716 aa)
	AOT69852.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (118 aa)
	AOT69853.1	Cysteine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
	AOT69854.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
	AOT69855.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
	AOT73255.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
	AOT71980.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)

Your Current Organism:

Geosporobacter ferrireducens

NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOT69149.1	AOT69852.1	Gferi_05985	Gferi_09840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400
AOT69149.1	AOT69853.1	Gferi_05985	Gferi_09845	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
AOT69149.1	AOT69854.1	Gferi_05985	Gferi_09850	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
AOT69149.1	AOT69855.1	Gferi_05985	Gferi_09855	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
AOT69149.1	AOT71980.1	Gferi_05985	Gferi_22025	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.402
AOT69490.1	AOT69491.1	Gferi_07840	Gferi_07845	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.975
AOT69490.1	AOT69492.1	Gferi_07840	Gferi_07850	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.996
AOT69490.1	AOT69493.1	Gferi_07840	Gferi_07855	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.991
AOT69490.1	AOT69847.1	Gferi_07840	Gferi_09815	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Heme ABC transporter substrate-binding protein IsdE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
AOT69490.1	AOT73067.1	Gferi_07840	Gferi_09810	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.987
AOT69491.1	AOT69490.1	Gferi_07845	Gferi_07840	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AOT69491.1	AOT69492.1	Gferi_07845	Gferi_07850	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.932
AOT69491.1	AOT69493.1	Gferi_07845	Gferi_07855	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AOT69491.1	AOT69846.1	Gferi_07845	Gferi_09805	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.896
AOT69491.1	AOT69847.1	Gferi_07845	Gferi_09815	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Heme ABC transporter substrate-binding protein IsdE; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.802
AOT69491.1	AOT73067.1	Gferi_07845	Gferi_09810	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.617
AOT69492.1	AOT69490.1	Gferi_07850	Gferi_07840	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron dicitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AOT69492.1	AOT69491.1	Gferi_07850	Gferi_07845	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.932
AOT69492.1	AOT69493.1	Gferi_07850	Gferi_07855	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AOT69492.1	AOT69846.1	Gferi_07850	Gferi_09805	Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985