STRINGSTRING
AOT69419.1 AOT69419.1 AOT73036.1 AOT73036.1 AOT69681.1 AOT69681.1 AOT70189.1 AOT70189.1 AOT70541.1 AOT70541.1 AOT71215.1 AOT71215.1 AOT71595.1 AOT71595.1 AOT72143.1 AOT72143.1 AOT72144.1 AOT72144.1 AOT72145.1 AOT72145.1 AOT72195.1 AOT72195.1 AOT72278.1 AOT72278.1 AOT72917.1 AOT72917.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOT69419.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
AOT73036.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
AOT69681.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AOT70189.1Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)
AOT70541.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (465 aa)
AOT71215.1Multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family. (615 aa)
AOT71595.1Spore gernimation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
AOT72143.1Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
AOT72144.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AOT72145.1Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
AOT72195.1Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
AOT72278.1Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
AOT72917.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (101 aa)
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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