STRINGSTRING
AOT69767.1 AOT69767.1 AOT70774.1 AOT70774.1 AOT70844.1 AOT70844.1 AOT71734.1 AOT71734.1 AOT72677.1 AOT72677.1 AOT72175.1 AOT72175.1 codY codY AOT68833.1 AOT68833.1 AOT68985.1 AOT68985.1 AOT69309.1 AOT69309.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOT69767.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (438 aa)
AOT70774.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1182 aa)
AOT70844.1Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
AOT71734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (421 aa)
AOT72677.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
AOT72175.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
codYTranscriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. (259 aa)
AOT68833.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (589 aa)
AOT68985.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
AOT69309.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (978 aa)
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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