Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOT68214.1 | AOT68224.1 | Gferi_00605 | Gferi_00665 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | 0.880 |
| AOT68214.1 | AOT70607.1 | Gferi_00605 | Gferi_14120 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminotransferase class I/II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AOT68214.1 | AOT70731.1 | Gferi_00605 | Gferi_14790 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | 0.884 |
| AOT68214.1 | AOT71045.1 | Gferi_00605 | Gferi_16660 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | 0.845 |
| AOT68214.1 | AOT71370.1 | Gferi_00605 | Gferi_18525 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.905 |
| AOT68214.1 | AOT71512.1 | Gferi_00605 | Gferi_19440 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.901 |
| AOT68214.1 | AOT72579.1 | Gferi_00605 | Gferi_25300 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Citrate synthase; Catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.864 |
| AOT68214.1 | AOT72580.1 | Gferi_00605 | Gferi_25305 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isocitrate dehydrogenase; Catalyzes the formation of 2-oxoglutarate from isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.825 |
| AOT68214.1 | AOT72643.1 | Gferi_00605 | Gferi_25665 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the aspartokinase family. | 0.864 |
| AOT68214.1 | argJ | Gferi_00605 | Gferi_12830 | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.913 |
| AOT68224.1 | AOT68214.1 | Gferi_00665 | Gferi_00605 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.880 |
| AOT68224.1 | AOT70607.1 | Gferi_00665 | Gferi_14120 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Aminotransferase class I/II; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.845 |
| AOT68224.1 | AOT71370.1 | Gferi_00665 | Gferi_18525 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.865 |
| AOT68224.1 | asd | Gferi_00665 | Gferi_04230 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.983 |
| AOT68224.1 | asd-2 | Gferi_00665 | Gferi_25670 | Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.981 |
| AOT68699.1 | argC | Gferi_03375 | Gferi_12825 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.468 |
| AOT68699.1 | argD | Gferi_03375 | Gferi_12815 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.915 |
| AOT68699.1 | argJ | Gferi_03375 | Gferi_12830 | Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. | Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. | 0.913 |
| AOT69071.1 | AOT69074.1 | Gferi_05560 | Gferi_05575 | Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.993 |
| AOT69071.1 | AOT69401.1 | Gferi_05560 | Gferi_07335 | Acetolactate synthase, large subunit, biosynthetic type; Derived by automated computational analysis using gene prediction method: Protein Homology. | Branched chain amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.615 |
page 1 of 27