STRINGSTRING
AOT68660.1 AOT68660.1 AOT69294.1 AOT69294.1 AOT69295.1 AOT69295.1 AOT69317.1 AOT69317.1 AOT69466.1 AOT69466.1 AOT73037.1 AOT73037.1 Gferi_07980 Gferi_07980 AOT69571.1 AOT69571.1 AOT69572.1 AOT69572.1 AOT69573.1 AOT69573.1 AOT69658.1 AOT69658.1 AOT69679.1 AOT69679.1 AOT73059.1 AOT73059.1 AOT69794.1 AOT69794.1 AOT69795.1 AOT69795.1 AOT73060.1 AOT73060.1 AOT69796.1 AOT69796.1 AOT69870.1 AOT69870.1 AOT70482.1 AOT70482.1 AOT70585.1 AOT70585.1 AOT70852.1 AOT70852.1 AOT71666.1 AOT71666.1 AOT71667.1 AOT71667.1 AOT71857.1 AOT71857.1 AOT71895.1 AOT71895.1 AOT71896.1 AOT71896.1 AOT73252.1 AOT73252.1 AOT72006.1 AOT72006.1 AOT72007.1 AOT72007.1 AOT72059.1 AOT72059.1 AOT72060.1 AOT72060.1 AOT73267.1 AOT73267.1 AOT72061.1 AOT72061.1 AOT72062.1 AOT72062.1 AOT72484.1 AOT72484.1 AOT72485.1 AOT72485.1 AOT72618.1 AOT72618.1 AOT72754.1 AOT72754.1 AOT73329.1 AOT73329.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOT68660.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (959 aa)
AOT69294.1BlaI/MecI/CopY family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
AOT69295.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (813 aa)
AOT69317.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (150 aa)
AOT69466.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
AOT73037.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)
Gferi_07980Peptidase M56; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (120 aa)
AOT69571.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (293 aa)
AOT69572.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)
AOT69573.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
AOT69658.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
AOT69679.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (430 aa)
AOT73059.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
AOT69794.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (327 aa)
AOT69795.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (340 aa)
AOT73060.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
AOT69796.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
AOT69870.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
AOT70482.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (362 aa)
AOT70585.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (552 aa)
AOT70852.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
AOT71666.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
AOT71667.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1114 aa)
AOT71857.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
AOT71895.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (575 aa)
AOT71896.1BlaI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
AOT73252.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (318 aa)
AOT72006.1BlaI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)
AOT72007.1Peptidase M56, BlaR1; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
AOT72059.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
AOT72060.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
AOT73267.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AOT72061.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (342 aa)
AOT72062.1With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
AOT72484.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (299 aa)
AOT72485.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AOT72618.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
AOT72754.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (919 aa)
AOT73329.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
Your Current Organism:
Geosporobacter ferrireducens
NCBI taxonomy Id: 1424294
Other names: G. ferrireducens, Geosporobacter sp. IRF9, JCM 19987, KCTC 15395, strain IRF9
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