STRINGSTRING
CDK97347.1 CDK97347.1 murA murA rffE rffE glmM glmM CDK98764.1 CDK98764.1 rfbB rfbB glmS glmS glmU glmU capL capL CDL00591.1 CDL00591.1 CDL00592.1 CDL00592.1 CDL00603.1 CDL00603.1 CDL00604.1 CDL00604.1 CDL00605.1 CDL00605.1 CDL00606.1 CDL00606.1 CDL00607.1 CDL00607.1 CDL00608.1 CDL00608.1 CDL00609.1 CDL00609.1 CDL00610.1 CDL00610.1 CDL00611.1 CDL00611.1 CDL00612.1 CDL00612.1 rfbG rfbG rfbF rfbF CDL00616.1 CDL00616.1 CDL00617.1 CDL00617.1 CDL00618.1 CDL00618.1 CDL00661.1 CDL00661.1 CDL00662.1 CDL00662.1 degT degT wecB wecB manC manC CDL00764.1 CDL00764.1 gtaB gtaB rkpK rkpK exoC exoC gtaB-2 gtaB-2 rfbC rfbC CDL01413.1 CDL01413.1 galE-2 galE-2 rmlA rmlA CDL01427.1 CDL01427.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDK97347.1Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (345 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (432 aa)
rffEUDP-N-acetyl glucosamine-2-epimerase; Function of strongly homologous gene; enzyme; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (377 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (450 aa)
CDK98764.1Putative UDP-glucose epimerase, containing with NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (326 aa)
rfbBdTDP-D-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (341 aa)
glmSL-glutamine:D-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (607 aa)
glmUBifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (454 aa)
capLProtein CapL; Function of strongly homologous gene; enzyme; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (422 aa)
CDL00591.1Putative NAD-dependent epimerase/dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (353 aa)
CDL00592.1Homologs of previously reported genes of unknown function. (309 aa)
CDL00603.1Protein of unknown function; No homology to any previously reported sequences. (309 aa)
CDL00604.1Homologs of previously reported genes of unknown function; Belongs to the DegT/DnrJ/EryC1 family. (312 aa)
CDL00605.1Homologs of previously reported genes of unknown function. (406 aa)
CDL00606.1Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (379 aa)
CDL00607.1Homologs of previously reported genes of unknown function. (354 aa)
CDL00608.1Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (366 aa)
CDL00609.1Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (395 aa)
CDL00610.1Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (671 aa)
CDL00611.1Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (315 aa)
CDL00612.1Putative nucleotide sugar epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (148 aa)
rfbGCDP-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (368 aa)
rfbFGlucose-1-phosphate cytidylyltransferase; Function of strongly homologous gene; enzyme. (259 aa)
CDL00616.1Homologs of previously reported genes of unknown function. (319 aa)
CDL00617.1Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (323 aa)
CDL00618.1Putative Spore coat polysaccharide biosynthesis protein spsC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family. (377 aa)
CDL00661.1Putative Nodulation protein L; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (168 aa)
CDL00662.1Putative Serine acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (180 aa)
degTPutative pleiotropic regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the DegT/DnrJ/EryC1 family. (379 aa)
wecBUDP-N-acetylglucosamine 2-epimerase; Function of strongly homologous gene; putative enzyme; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (369 aa)
manCMannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family. (463 aa)
CDL00764.1Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (316 aa)
gtaBUTP-glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (290 aa)
rkpKUDP-glucose 6-dehydrogenase (UDP-Glc dehydrogenase) (UDP-GlcDH) (UDPGDH); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (434 aa)
exoCPhosphomannomutase; Function of strongly homologous gene; enzyme. (458 aa)
gtaB-2UTP--glucose-1-phosphate uridylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (291 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (165 aa)
CDL01413.1Putative Nucleotidyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (237 aa)
galE-2UDP-glucose 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (328 aa)
rmlAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (291 aa)
CDL01427.1Putative acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (231 aa)
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
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