STRINGSTRING
queG queG queF queF CDK99063.1 CDK99063.1 queA queA tgt tgt CDL00183.1 CDL00183.1 queC queC CDL01130.1 CDL01130.1 CDL01131.1 CDL01131.1 CDL01132.1 CDL01132.1 queE queE CDL01134.1 CDL01134.1 CDL01135.1 CDL01135.1 CDL01136.1 CDL01136.1 CDL01137.1 CDL01137.1 gpsA gpsA CDL01139.1 CDL01139.1 CDL01140.1 CDL01140.1 CDL01141.1 CDL01141.1 CDL01143.1 CDL01143.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
queGConserved protein of unknown function,containing iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (341 aa)
queFNADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (152 aa)
CDK99063.1Putative serine/threonine-specific protein phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (253 aa)
queAS-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (345 aa)
tgttRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase); Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophil [...] (376 aa)
CDL00183.1Conserved protein of unknown function, containing truncated bacterial-like Globin domain; Homologs of previously reported genes of unknown function. (133 aa)
queC7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (230 aa)
CDL01130.1Protein of unknown function; No homology to any previously reported sequences. (181 aa)
CDL01131.1Putative ATP-dependent RNA helicase SUV3, mitochondrial; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (820 aa)
CDL01132.1Putative 6-carboxy-5,6,7,8-tetrahydropterin synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (176 aa)
queEPutative 7-carboxy-7-deazaguanine synthase homolog; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (210 aa)
CDL01134.1Homologs of previously reported genes of unknown function. (113 aa)
CDL01135.1Putative Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. (245 aa)
CDL01136.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (145 aa)
CDL01137.1Putative protease, membrane anchored; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (318 aa)
gpsAGlycerol-3-phosphate dehydrogenase (NAD+); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (330 aa)
CDL01139.1Putative Protein yciI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (93 aa)
CDL01140.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (137 aa)
CDL01141.1Rieske (2Fe-2S) domain protein; Function of strongly homologous gene; factor. (114 aa)
CDL01143.1Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (269 aa)
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
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