STRINGSTRING
cbbZ-2 cbbZ-2 cbbA cbbA CDL01375.1 CDL01375.1 CDL01397.1 CDL01397.1 nifH nifH CDK97969.1 CDK97969.1 cbbP cbbP cbbM cbbM cobN cobN CDK98646.1 CDK98646.1 cbbZ cbbZ CDL00439.1 CDL00439.1 CDL00636.1 CDL00636.1 CDL00640.1 CDL00640.1 CDK97436.1 CDK97436.1 CDK97808.1 CDK97808.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cbbZ-2Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (218 aa)
cbbAFructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (354 aa)
CDL01375.1Homologs of previously reported genes of unknown function. (360 aa)
CDL01397.1Putative Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (672 aa)
nifHNitrogenase iron protein, nifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (293 aa)
CDK97969.1Homologs of previously reported genes of unknown function. (569 aa)
cbbPPhosphoribulokinase (Phosphopentokinase) (PRKase) (PRK); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (297 aa)
cbbMRibulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. (461 aa)
cobNAerobic cobaltochelatase subunit CobN; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (1216 aa)
CDK98646.1Homologs of previously reported genes of unknown function. (188 aa)
cbbZPhosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (220 aa)
CDL00439.1Conserved protein of SCO1/SenC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (194 aa)
CDL00636.1Protein of unknown function; No homology to any previously reported sequences. (711 aa)
CDL00640.1Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (515 aa)
CDK97436.1Putative von Willebrand factor, type A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (484 aa)
CDK97808.1Putative radical SAM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (501 aa)
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
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