(17 nodes) Positive regulation of transcription, DNA-templated network (Magnetospirillum gryphiswaldense)

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

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Your Input:
	CDK98202.1	Protein of unknown function; No homology to any previously reported sequences. (102 aa)
	rpoN	RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (497 aa)
	CDL01469.1	Putative Antagonist of anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (102 aa)
	CDK98449.1	Conserved protein of unknown function （contains anti-sigma factor antagonist domain） Homologs of previously reported genes of unknown function. (215 aa)
	CDK98569.1	STAS domain-containing protein; Homologs of previously reported genes of unknown function. (102 aa)
	CDK98639.1	Putative Methylamine utilization ferredoxin-type protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (328 aa)
	CDK98796.1	Transcriptional regulator PadR-like family protein; Function of strongly homologous gene; regulator. (146 aa)
	CDK98952.1	Putative Anti-sigma factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the anti-sigma-factor antagonist family. (108 aa)
	CDK99093.1	STAS domain-containing protein; Homologs of previously reported genes of unknown function. (99 aa)
	napH	Ferredoxin-type protein napH homolog; Function of homologous gene experimentally demonstrated in an other organism; carrier. (310 aa)
	CDK99294.1	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (100 aa)
	CDK99731.1	Response regulator of the LytR/AlgR family; Function of homologous gene experimentally demonstrated in an other organism; regulator. (257 aa)
	fixG	Nitrogen fixation protein fixG; Function of strongly homologous gene; transporter. (480 aa)
	glnD	[Protein-PII] uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (920 aa)
	CDL01169.1	Putative Peptidase C14, caspase catalytic subunit p20; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (761 aa)
	CDL01332.1	Putative anti-sigma factor antagonist BtrV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the anti-sigma-factor antagonist family. (108 aa)
	CDK97665.1	Putative Cytochrome c oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (488 aa)

Your Current Organism:

Magnetospirillum gryphiswaldense

NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDK98449.1	CDK98569.1	MGMSRv2__1234	MGMSRv2__1354	Conserved protein of unknown function （contains anti-sigma factor antagonist domain） Homologs of previously reported genes of unknown function.	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	0.726
CDK98569.1	CDK98449.1	MGMSRv2__1354	MGMSRv2__1234	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	Conserved protein of unknown function （contains anti-sigma factor antagonist domain） Homologs of previously reported genes of unknown function.	0.726
CDK98569.1	CDK99093.1	MGMSRv2__1354	MGMSRv2__1878	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	0.765
CDK98569.1	CDK99294.1	MGMSRv2__1354	MGMSRv2__2079	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.966
CDK98569.1	CDL01469.1	MGMSRv2__1354	MGMSRv2__4254	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	Putative Antagonist of anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.973
CDK99093.1	CDK98569.1	MGMSRv2__1878	MGMSRv2__1354	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	0.765
CDK99093.1	CDK99294.1	MGMSRv2__1878	MGMSRv2__2079	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.547
CDK99294.1	CDK98569.1	MGMSRv2__2079	MGMSRv2__1354	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	0.966
CDK99294.1	CDK99093.1	MGMSRv2__2079	MGMSRv2__1878	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	0.547
CDK99294.1	CDL01469.1	MGMSRv2__2079	MGMSRv2__4254	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative Antagonist of anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.972
CDL01469.1	CDK98569.1	MGMSRv2__4254	MGMSRv2__1354	Putative Antagonist of anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	STAS domain-containing protein; Homologs of previously reported genes of unknown function.	0.973
CDL01469.1	CDK99294.1	MGMSRv2__4254	MGMSRv2__2079	Putative Antagonist of anti-sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	Putative antisigma-factor antagonist STAS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.972