STRINGSTRING
yciA yciA nifS nifS fixB-2 fixB-2 maiA maiA matA matA iscS iscS CDK97419.1 CDK97419.1 CDK97428.1 CDK97428.1 CDK97553.1 CDK97553.1 fixB fixB CDK97408.1 CDK97408.1 nusG nusG CDK97621.1 CDK97621.1 CDK97624.1 CDK97624.1 CDK98073.1 CDK98073.1 etfA-2 etfA-2 acs acs CDL01131.1 CDL01131.1 CDL00905.1 CDL00905.1 nusA nusA CDL00368.1 CDL00368.1 accC-2 accC-2 gcvT gcvT acsA-2 acsA-2 mmgC mmgC mms6 mms6 CDK99445.1 CDK99445.1 CDK99302.1 CDK99302.1 CDK99209.1 CDK99209.1 CDK99068.1 CDK99068.1 CDK98832.1 CDK98832.1 acsA acsA etfA etfA CDK98768.1 CDK98768.1 CDK98680.1 CDK98680.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yciAAcyl-CoA thioester hydrolase; Function of strongly homologous gene; enzyme. (132 aa)
nifSCysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (376 aa)
fixB-2Protein FixB; Function of strongly homologous gene; carrier. (366 aa)
maiAMaleylacetoacetate isomerase; Function of strongly homologous gene; enzyme. (215 aa)
matAMalonyl-CoA decarboxylase; Function of strongly homologous gene; enzyme. (471 aa)
iscSCysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS); Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. (412 aa)
CDK97419.1acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (379 aa)
CDK97428.1Homologs of previously reported genes of unknown function. (520 aa)
CDK97553.1Putative sulphatase-modifying factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (243 aa)
fixBElectron transfer flavoprotein, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier. (368 aa)
CDK97408.1Acyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (380 aa)
nusGComponent in transcription antitermination; Participates in transcription elongation, termination and antitermination. (177 aa)
CDK97621.1Acetyl-CoA carboxylase, biotin carboxylase subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (664 aa)
CDK97624.1Acyl-CoA dehydrogenase/oxidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (387 aa)
CDK98073.1Putative Zn-dependent hydrolases of the beta-lactamase fold; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (262 aa)
etfA-2Electron transfer flavoprotein (alpha subunit); Function of strongly homologous gene; enzyme. (311 aa)
acsacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
CDL01131.1Putative ATP-dependent RNA helicase SUV3, mitochondrial; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (820 aa)
CDL00905.1Homologs of previously reported genes of unknown function. (215 aa)
nusATranscription elongation protein nusA (N utilization substance protein A) (L factor); Participates in both transcription termination and antitermination. (503 aa)
CDL00368.1ATP12 ATPase; Homologs of previously reported genes of unknown function; enzyme. (235 aa)
accC-2Putative acyl-CoA carboxylase biotin-carrying subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (662 aa)
gcvTGlycine cleavage system T-protein (aminomethyltransferase); Function of strongly homologous gene; enzyme. (370 aa)
acsA-2Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme); Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. (645 aa)
mmgCAcyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (554 aa)
mms6Magnetosome protein Mms6; Promotes the formation of magnetite in Fe(2+)-rich conditions, when magnetite is not readily formed. Binds both Fe(2+) and Fe(3+). May help control the production of crystals with a specific morphology (By similarity). May function with MamX, MamY amd MamZ in biomineralization (Probable). The 4 genes of this operon collectively influence magnetosome size and number. (159 aa)
CDK99445.1poly(A) polymerase I; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (432 aa)
CDK99302.1Putative 5'-Nucleotidase/apyrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 5'-nucleotidase family. (561 aa)
CDK99209.1Putative Fumarylacetoacetate hydrolase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (238 aa)
CDK99068.1Putative Acetyl-coenzyme A synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (549 aa)
CDK98832.1Putative short chain acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (392 aa)
acsAAcetyl-coenzyme A synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (588 aa)
etfAElectron transfer flavoprotein (alpha subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (308 aa)
CDK98768.1Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (584 aa)
CDK98680.1Putative propionyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (637 aa)
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.