STRINGSTRING
CDK98640.1 CDK98640.1 CDK97767.1 CDK97767.1 CDK97765.1 CDK97765.1 ctaD ctaD folK folK CDK97570.1 CDK97570.1 fdxB fdxB CDK97488.1 CDK97488.1 CDK97770.1 CDK97770.1 CDK98047.1 CDK98047.1 CDK98427.1 CDK98427.1 CDK98473.1 CDK98473.1 nuoK nuoK nuoI nuoI nuoG nuoG nqo1 nqo1 nuoE nuoE nuoB nuoB CDK98606.1 CDK98606.1 CDK98621.1 CDK98621.1 CDK98622.1 CDK98622.1 CDK98643.1 CDK98643.1 CDK98644.1 CDK98644.1 CDK98650.1 CDK98650.1 fdx fdx norB norB norC norC CDK98963.1 CDK98963.1 nuoF nuoF CDK98971.1 CDK98971.1 apt apt napF napF CDK99298.1 CDK99298.1 CDK99363.1 CDK99363.1 CDK99367.1 CDK99367.1 shp shp sdhB sdhB sdhA sdhA sdhC sdhC igaA igaA CDL00047.1 CDL00047.1 fixP fixP ccoO ccoO fixN fixN CDL00483.1 CDL00483.1 CDL00490.1 CDL00490.1 yhbV yhbV CDL01348.1 CDL01348.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDK98640.1Ferredoxin-type protein NapG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (252 aa)
CDK97767.1Cytochrome c553; Function of strongly homologous gene; enzyme. (102 aa)
CDK97765.1Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (269 aa)
ctaDCytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (526 aa)
folK7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase(HPPK); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (165 aa)
CDK97570.1Ferredoxin-like protein in nif region; Function of homologous gene experimentally demonstrated in an other organism; carrier. (62 aa)
fdxBFerredoxin III 4[4Fe-4S], nif-specific; Function of homologous gene experimentally demonstrated in an other organism; carrier. (96 aa)
CDK97488.1Homologs of previously reported genes of unknown function. (424 aa)
CDK97770.1Conserved protein of unknown function,containing cytochrome c domain; Homologs of previously reported genes of unknown function. (224 aa)
CDK98047.1Putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (116 aa)
CDK98427.1Homologs of previously reported genes of unknown function. (148 aa)
CDK98473.1Putative cytochrome subunit of sulfide dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (101 aa)
nuoKPutative NADH:ubiquinone oxidoreductase, membrane subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (103 aa)
nuoINADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (162 aa)
nuoGNADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (691 aa)
nqo1NADH-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (426 aa)
nuoENADH dehydrogenase I chain E; Function of strongly homologous gene; enzyme. (201 aa)
nuoBNADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (193 aa)
CDK98606.1Homologs of previously reported genes of unknown function. (555 aa)
CDK98621.1Homologs of previously reported genes of unknown function. (137 aa)
CDK98622.1Putative Permease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (421 aa)
CDK98643.1Putative Cytochrome c4; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (255 aa)
CDK98644.1Putative Cytochrome c4; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (199 aa)
CDK98650.1Conserved exported protein of unknown function, containing cytochrome c domain; Homologs of previously reported genes of unknown function. (244 aa)
fdxFerredoxin; Function of homologous gene experimentally demonstrated in an other organism; carrier. (79 aa)
norBNitric oxide reductase subunit B; Function of strongly homologous gene; enzyme; Belongs to the heme-copper respiratory oxidase family. (445 aa)
norCNitric oxide reductase subunit C; Function of strongly homologous gene; enzyme. (149 aa)
CDK98963.1Conserved protein of unknown function, containing Cytochrome c domain; Homologs of previously reported genes of unknown function. (124 aa)
nuoFNADH-quinone oxidoreductase subunit F, NuoF; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (511 aa)
CDK98971.1Putative NADH-quinone oxidoreductase subunit E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (152 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (174 aa)
napFFerredoxin-type protein NapF; Function experimentally demonstrated in the studied genus; enzyme. (103 aa)
CDK99298.1Putative cytochrome c domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (150 aa)
CDK99363.1Putative ETC complex I subunit conserved region protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (102 aa)
CDK99367.1Putative Cytochrome B561; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (152 aa)
shpCytochrome c-type protein SHP; Function of homologous gene experimentally demonstrated in an other organism; transporter. (135 aa)
sdhBSuccinate dehydrogenase, Fe-S protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (593 aa)
sdhCSuccinate dehydrogenase cytochrome b556 subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (126 aa)
igaAIntracellular growth attenuator protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. (229 aa)
CDL00047.1Putative Cytochrome c domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (237 aa)
fixPCytochrome c oxidase, cbb3-type, FixP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (291 aa)
ccoOCytochrome C oxidase, mono-heme subunit/FixO; Function of strongly homologous gene; carrier. (243 aa)
fixNCytochrome c oxidase subunit 1 homolog, bacteroid; Function of strongly homologous gene; transporter; Belongs to the heme-copper respiratory oxidase family. (483 aa)
CDL00483.1Putative Cytochrome c-552; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (101 aa)
CDL00490.1Putative Cytochrome c domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (140 aa)
yhbVProtease; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (308 aa)
CDL01348.1Putative NADH-ubiquinone oxidoreductase 40 kDa subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (327 aa)
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
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