STRINGSTRING
mamM mamM CDK99559.1 CDK99559.1 fieF fieF mamB mamB fieF-2 fieF-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mamMMagnetosome protein MamM, containing Cation efflux protein; Essential for magnetosome formation; required for stable accumulation of MamB. May nucleate iron crystal formation (Probable). Probably binds and transports iron. Binds divalent cations, possibly up to 3 Zn(2+) per dimer in vitro, probably iron in vivo (Probable). One of 7 genes (mamLQBIEMO) able to induce magnetosome membrane biogenesis; coexpression of mamLQRBIEMO in a deletion of the 17 gene mamAB operon restores magnetosome vesicle formation but not magnetite biosynthesis. (318 aa)
CDK99559.1Putative Cation efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (331 aa)
fieFZinc transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (319 aa)
mamBMagnetosome protein MamB, Cation efflux protein; Plays a dual, essential role in magnetosome formation; required for magnetosome vesicle formation as well as biomineralization (Probable). Requires heterodimerization with MamM for stability. Probably binds and transports iron (Probable). One of 7 genes (mamLQBIEMO) able to induce magnetosome membrane biogenesis; coexpression of mamLQRBIEMO in a deletion of the 17 gene mamAB operon restores magnetosome vesicle formation but not magnetite biosynthesis. (297 aa)
fieF-2Zinc transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (307 aa)
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
Server load: low (12%) [HD]