Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM3 | A0A015M072 | A0A015NFC7 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | LSM4 | A0A015M072 | A0A015KMV0 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | LSM5 | A0A015M072 | A0A015JV38 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.999 |
| LSM1 | LSM8 | A0A015M072 | A0A015J1T6 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.989 |
| LSM1 | RirG_013360 | A0A015M072 | A0A015M122 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Lsm6p. | 0.999 |
| LSM1 | RirG_032980 | A0A015M072 | A0A015LUS6 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Smx3p. | 0.779 |
| LSM1 | RirG_036240 | A0A015M072 | A0A015K980 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Small nuclear ribonucleoprotein G. | 0.546 |
| LSM1 | RirG_036700 | A0A015M072 | A0A015L8M4 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.954 |
| LSM1 | RirG_055570 | A0A015M072 | A0A015K2T7 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.954 |
| LSM1 | RirG_073960 | A0A015M072 | A0A015MYR9 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Dbp2p. | 0.643 |
| LSM1 | RirG_074760 | A0A015M072 | A0A015JQR0 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Small nuclear ribonucleoprotein Sm D2. | 0.637 |
| LSM1 | RirG_075190 | A0A015M072 | A0A015MYC2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.709 |
| LSM1 | RirG_091590 | A0A015M072 | A0A015JKC6 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.613 |
| LSM1 | RirG_094020 | A0A015M072 | A0A015LAZ2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Small nuclear ribonucleoprotein Sm D3. | 0.522 |
| LSM1 | RirG_166100 | A0A015M072 | A0A015K3G7 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Prp4p. | 0.402 |
| LSM1 | RirG_174590 | A0A015M072 | A0A015K0W1 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Pat1p. | 0.999 |
| LSM1 | RirG_181160 | A0A015M072 | A0A015M079 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | RirG_190240 | A0A015M072 | A0A015IY32 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Prp24p. | 0.435 |
| LSM1 | RirG_190250 | A0A015M072 | A0A015KI49 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Small nuclear ribonucleoprotein-associated protein. | 0.511 |
| LSM1 | RirG_266550 | A0A015M072 | A0A015IAR2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Lsm7p. | 0.984 |
page 1 of 809