STRINGSTRING
AKB23621.1 AKB23621.1 AKB23685.1 AKB23685.1 AKB24240.1 AKB24240.1 AKB24241.1 AKB24241.1 AKB24242.1 AKB24242.1 AKB24396.1 AKB24396.1 AKB24397.1 AKB24397.1 AKB24398.1 AKB24398.1 AKB24399.1 AKB24399.1 AKB24400.1 AKB24400.1 AKB24401.1 AKB24401.1 AKB24402.1 AKB24402.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKB23621.1Hypothetical protein. (340 aa)
AKB23685.1Hypothetical protein. (528 aa)
AKB24240.1UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (439 aa)
AKB24241.1Hypothetical protein. (346 aa)
AKB24242.1Polysaccharide deacetylase. (304 aa)
AKB24396.1Polysaccharide deacetylase. (566 aa)
AKB24397.1Hypothetical protein. (323 aa)
AKB24398.1Pleiotropic regulatory protein; Belongs to the DegT/DnrJ/EryC1 family. (406 aa)
AKB24399.1Polysaccharide deacetylase. (258 aa)
AKB24400.1Hypothetical protein. (360 aa)
AKB24401.1UDP-N-acetylglucosamine 2-epimerase. (354 aa)
AKB24402.1Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids. (427 aa)
Your Current Organism:
Methanosarcina sp. MTP4
NCBI taxonomy Id: 1434100
Other names: M. sp. MTP4
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