Your Input: | |
| | AKB19531.1 | Type I restriction-modification enzyme M subunit. (686 aa) |
| | AKB16871.1 | Mobile element protein. (118 aa) |
| | rtcA | RNA 3'-terminal phosphate cyclase; Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing. (355 aa) |
| | dnaG | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. (516 aa) |
| | AKB16886.1 | Mobile element protein. (153 aa) |
| | AKB16895.1 | Putative deoxyribonuclease YcfH. (252 aa) |
| | AKB16906.1 | Mobile element protein. (53 aa) |
| | polC | Archaeal DNA polymerase II large subunit; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase. (1150 aa) |
| | AKB16971.1 | Mobile element protein. (118 aa) |
| | gatB | Aspartyl-tRNA(Asn) amidotransferase subunit B / Glutamyl-tRNA(Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (495 aa) |
| | gatA | Aspartyl-tRNA(Asn) amidotransferase subunit A / Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (475 aa) |
| | gatC | Aspartyl-tRNA(Asn) amidotransferase subunit C / Glutamyl-tRNA(Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. (93 aa) |
| | pheS | Phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily. (492 aa) |
| | trpS | Tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). (437 aa) |
| | alaS | Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (925 aa) |
| | AKB17001.1 | Bipolar DNA helicase. (447 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. (233 aa) |
| | AKB17007.1 | tRNA-(G10-N2) dimethyltransferase. (348 aa) |
| | rtcB | RNA-2',3'-PO4:RNA-5'-OH ligase; Belongs to the RtcB family. (500 aa) |
| | rnp4 | Ribonuclease P protein component 4; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. (107 aa) |
| | AKB17096.1 | Mobile element protein. (118 aa) |
| | AKB17113.1 | DNA repair helicase. (779 aa) |
| | AKB17134.1 | Mobile element protein. (118 aa) |
| | AKB17139.1 | Hypothetical protein. (141 aa) |
| | AKB17141.1 | Mobile element protein. (118 aa) |
| | AKB17178.1 | Mobile element protein. (118 aa) |
| | AKB17186.1 | G:T/U mismatch-specific uracil/thymine DNA-glycosylase. (158 aa) |
| | mutL | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (687 aa) |
| | mutS | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (900 aa) |
| | AKB17207.1 | Mobile element protein. (53 aa) |
| | AKB17210.1 | Hypothetical protein. (146 aa) |
| | AKB17223.1 | Seryl-tRNA synthetase. (368 aa) |
| | metG | Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (711 aa) |
| | dbh | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. (356 aa) |
| | nth-2 | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (234 aa) |
| | AKB17249.1 | Mobile element protein. (153 aa) |
| | fen | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] (338 aa) |
| | AKB17259.1 | Transposase. (265 aa) |
| | AKB17278.1 | Mobile element protein. (153 aa) |
| | AKB17289.1 | Mobile element protein. (118 aa) |
| | rfcS | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. (334 aa) |
| | AKB17302.1 | Mobile element protein. (153 aa) |
| | AKB17307.1 | tRNA:Cm32/Um32 methyltransferase. (245 aa) |
| | AKB17333.1 | Bipolar DNA helicase. (704 aa) |
| | rpoL | DNA-directed RNA polymerase subunit L; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family. (92 aa) |
| | AKB17349.1 | Mobile element protein. (153 aa) |
| | AKB17370.1 | Mobile element protein. (92 aa) |
| | AKB17412.1 | Hypothetical protein. (109 aa) |
| | AKB17422.1 | Hypothetical protein. (130 aa) |
| | AKB17456.1 | Hypothetical protein. (153 aa) |
| | AKB17457.1 | Hypothetical protein. (82 aa) |
| | AKB17458.1 | Hypothetical protein. (40 aa) |
| | AKB17460.1 | Hypothetical protein. (95 aa) |
| | AKB17481.1 | Mobile element protein. (153 aa) |
| | hel308 | Putative ski2-type helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (730 aa) |
| | AKB17515.1 | Transposase, putative. (125 aa) |
| | radA | DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules. (325 aa) |
| | cca | tRNA nucleotidyltransferase, archaeal type; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. (454 aa) |
| | rpoD | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (266 aa) |
| | truB | tRNA pseudouridine 55 synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. (338 aa) |
| | AKB17587.1 | Ribonuclease P protein component 1. (65 aa) |
| | AKB17624.1 | Mobile element protein. (118 aa) |
| | AKB17637.1 | Mobile element protein. (50 aa) |
| | proS | Prolyl-tRNA synthetase, archaeal/eukaryal type; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). (480 aa) |
| | AKB17714.1 | NYN domain protein. (194 aa) |
| | AKB17740.1 | Mobile element protein. (153 aa) |
| | AKB17747.1 | Mobile element protein. (153 aa) |
| | AKB17762.1 | Deoxyribodipyrimidine photolyase, type II. (408 aa) |
| | AKB17777.1 | Mobile element protein. (118 aa) |
| | AKB17793.1 | Molybdopterin biosynthesis protein MoeB. (171 aa) |
| | AKB17844.1 | Integral membrane protein. (351 aa) |
| | valS | Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily. (869 aa) |
| | AKB17923.1 | Mobile element protein. (118 aa) |
| | AKB17946.1 | Mobile element protein. (67 aa) |
| | AKB17982.1 | Putative ATP-dependent helicase. (912 aa) |
| | AKB17985.1 | Mobile element protein. (118 aa) |
| | AKB17996.1 | Putative ATP-dependent RNA helicase. (402 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (958 aa) |
| | uvrC | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (518 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (670 aa) |
| | AKB18024.1 | Hypothetical protein. (38 aa) |
| | AKB18030.1 | Mobile element protein. (153 aa) |
| | AKB18041.1 | Hypothetical protein. (167 aa) |
| | AKB18052.1 | Mobile element protein. (118 aa) |
| | topA | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (751 aa) |
| | AKB18056.1 | Ribosome biogenesis protein TSR3; Probable pre-rRNA processing protein involved in ribosome biogenesis; Belongs to the TSR3 family. (173 aa) |
| | AKB18069.1 | Mobile element protein. (153 aa) |
| | AKB18075.1 | Hypothetical protein. (94 aa) |
| | AKB18091.1 | DNA topoisomerase I. (820 aa) |
| | AKB18097.1 | Metallo-beta-lactamase family protein. (418 aa) |
| | rfcL | Replication factor C large subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. (601 aa) |
| | AKB18133.1 | Gly-tRNA(Ala) deacylase. (245 aa) |
| | AKB18154.1 | Hef nuclease. (489 aa) |
| | AKB18158.1 | Type I restriction-modification system, DNA-methyltransferase subunit M. (512 aa) |
| | AKB18162.1 | Type I restriction-modification system, restriction subunit R. (1145 aa) |
| | ileS | Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1062 aa) |
| | rpl7ae | LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (120 aa) |
| | AKB18273.1 | Mobile element protein. (118 aa) |
| | dtdA | D-tyrosyl-tRNA(Tyr) deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo. (297 aa) |
| | AKB18322.1 | Mobile element protein. (118 aa) |
| | AKB18344.1 | Hypothetical protein. (357 aa) |
| | pheT | Phenylalanyl-tRNA synthetase beta chain. (542 aa) |
| | rnhB | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (227 aa) |
| | AKB18382.1 | Mobile element protein. (153 aa) |
| | AKB18384.1 | Hypothetical protein. (188 aa) |
| | AKB18397.1 | Mobile element protein. (118 aa) |
| | AKB18401.1 | Hypothetical protein. (71 aa) |
| | AKB18410.1 | Type I restriction-modification system, DNA-methyltransferase subunit M. (76 aa) |
| | AKB18488.1 | Hypothetical protein. (124 aa) |
| | AKB18516.1 | Mobile element protein. (118 aa) |
| | AKB18530.1 | Type I restriction-modification system, DNA-methyltransferase subunit M. (645 aa) |
| | dbh-2 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. (368 aa) |
| | AKB18572.1 | Putative type II restriction enzyme methylase subunit. (1185 aa) |
| | AKB18581.1 | ATP-dependent DNA helicase pcrA. (1102 aa) |
| | AKB18583.1 | Mobile element protein. (93 aa) |
| | AKB18614.1 | ATP-dependent DNA ligase. (152 aa) |
| | AKB18632.1 | Hypothetical protein. (93 aa) |
| | gatE | Glutamyl-tRNA(Gln) amidotransferase transferase subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (633 aa) |
| | thrS | Threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (635 aa) |
| | AKB18720.1 | Putative DNA or RNA helicase of superfamily II. (730 aa) |
| | AKB18729.1 | Type I restriction-modification system, DNA-methyltransferase subunit M. (504 aa) |
| | AKB18731.1 | Type I restriction-modification system, restriction subunit R. (1058 aa) |
| | AKB18735.1 | Mobile element protein. (118 aa) |
| | lig | ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (568 aa) |
| | AKB18755.1 | Mobile element protein. (153 aa) |
| | AKB18771.1 | DNA helicase related protein. (180 aa) |
| | AKB18779.1 | ATP-dependent DNA helicase RecQ. (911 aa) |
| | AKB18845.1 | Hypothetical protein. (286 aa) |
| | AKB18890.1 | Hypothetical protein. (102 aa) |
| | AKB18899.1 | Mobile element protein. (153 aa) |
| | AKB19029.1 | Transposase, putative. (104 aa) |
| | AKB19047.1 | Modification methylase MjaV. (583 aa) |
| | priS | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] (414 aa) |
| | AKB19112.1 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (181 aa) |
| | AKB19132.1 | Mobile element protein. (118 aa) |
| | AKB19146.1 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. (591 aa) |
| | AKB19152.1 | Mobile element protein. (118 aa) |
| | rnj | Putative Zn-dependent hydrolase in polyisoprenoid biosynthetic cluster; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. (447 aa) |
| | AKB19170.1 | DNA-directed RNA polymerase subunit K. (37 aa) |
| | gltX | Glutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (571 aa) |
| | hemA | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (440 aa) |
| | AKB19197.1 | Mobile element protein. (118 aa) |
| | AKB19240.1 | Transposase, putative. (70 aa) |
| | lysS | Lysyl-tRNA synthetase (class I); Belongs to the class-I aminoacyl-tRNA synthetase family. (537 aa) |
| | cysS | Cysteinyl-tRNA synthetase. (476 aa) |
| | AKB19251.1 | Hypothetical protein. (146 aa) |
| | AKB19260.1 | O-phosphoseryl-tRNA:Cysteinyl-tRNA synthase; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)); Belongs to the SepCysS family. (386 aa) |
| | lysS-2 | Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. (511 aa) |
| | AKB19262.1 | Putative ski2-type helicase. (931 aa) |
| | AKB19272.1 | Mobile element protein. (153 aa) |
| | AKB19293.1 | Hypothetical protein. (334 aa) |
| | tyrS | Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily. (317 aa) |
| | AKB19318.1 | Mobile element protein. (153 aa) |
| | AKB19362.1 | Archaeal DNA polymerase I. (948 aa) |
| | AKB19363.1 | Mobile element protein. (153 aa) |
| | AKB19393.1 | Endoribonuclease Nob1. (168 aa) |
| | hisS | Histidyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. (413 aa) |
| | endA | tRNA-intron endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. (350 aa) |
| | AKB19452.1 | Mobile element protein. (74 aa) |
| | AKB19466.1 | 3'-to-5' exoribonuclease RNase R. (591 aa) |
| | AKB19477.1 | Hypothetical protein. (158 aa) |
| | AKB19479.1 | CRISPR-associated helicase Cas3. (742 aa) |
| | cas2 | CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (85 aa) |
| | cas1 | CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (321 aa) |
| | AKB19506.1 | Nucleotide binding protein, PINc. (121 aa) |
| | AKB19507.1 | DNA-directed RNA polymerase subunit E'. (190 aa) |
| | AKB19553.1 | Hypothetical protein; RNA-free RNase P that catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. Belongs to the HARP family. (238 aa) |
| | AKB19559.1 | Mobile element protein. (118 aa) |
| | AKB19566.1 | Mobile element protein. (118 aa) |
| | AKB19577.1 | Uracil-DNA glycosylase, family 4. (197 aa) |
| | AKB19597.1 | 8-oxoguanine DNA glycosylase. (282 aa) |
| | AKB19622.1 | VrlJ. (165 aa) |
| | AKB19630.1 | Helicase (Snf2/Rad54 family). (968 aa) |
| | AKB19633.1 | Hypothetical protein. (671 aa) |
| | AKB19674.1 | Mobile element protein. (118 aa) |
| | gatD | Glutamyl-tRNA(Gln) amidotransferase asparaginase subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (424 aa) |
| | AKB19702.1 | Hypothetical protein. (97 aa) |
| | AKB19705.1 | (dimethylallyl)adenosine tRNA methylthiotransferase. (435 aa) |
| | mre11 | Exonuclease SbcD; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family. (617 aa) |
| | AKB19741.1 | Hypothetical protein. (282 aa) |
| | AKB19751.1 | CRISPR-associated helicase Cas3, protein. (917 aa) |
| | cas1-2 | CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (303 aa) |
| | rpoH | DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. (78 aa) |
| | AKB19777.1 | DNA-directed RNA polymerase subunit B''; Belongs to the RNA polymerase beta chain family. (531 aa) |
| | AKB19778.1 | DNA-directed RNA polymerase subunit B; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (604 aa) |
| | AKB19779.1 | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (880 aa) |
| | rpoA2 | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (398 aa) |
| | AKB19788.1 | Mobile element protein. (79 aa) |
| | leuS | Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (966 aa) |
| | AKB19805.1 | Hypothetical protein. (124 aa) |
| | rnz | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (305 aa) |
| | top6B | DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. (621 aa) |
| | top6A | DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. (369 aa) |
| | gyrB | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (634 aa) |
| | gyrA | DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (952 aa) |
| | AKB19844.1 | Chaperone protein. (986 aa) |
| | AKB19846.1 | Hypothetical protein. (115 aa) |
| | AKB19853.1 | Hypothetical protein. (96 aa) |
| | AKB19866.1 | Type I restriction-modification system, DNA-methyltransferase subunit M. (614 aa) |
| | truD | tRNA pseudouridine 13 synthase; Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (438 aa) |
| | pth | Peptidyl-tRNA hydrolase, archaeal type; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. (115 aa) |
| | AKB19907.1 | tRNA cytosine methylase Pos56; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs; Belongs to the aTrm56 family. (177 aa) |
| | AKB19915.1 | Mobile element protein. (118 aa) |
| | aspS | Aspartyl-tRNA synthetase / Aspartyl-tRNA(Asn) synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn). (444 aa) |
| | rnp3 | Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. (239 aa) |
| | rnp2 | Ribonuclease P protein component 2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. (132 aa) |
| | rrp41 | Ribonuclease PH; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails. (554 aa) |
| | rpoP | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. (45 aa) |
| | AKB19967.1 | Mobile element protein. (118 aa) |
| | AKB20009.1 | Mobile element protein. (118 aa) |
| | vapC | PIN domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (130 aa) |
| | thiI | tRNA S(4)U 4-thiouridine synthase (former ThiI); Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (438 aa) |
| | trm1 | tRNA N2,N2-dimethyl(Guanine26-N2)-methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (382 aa) |
| | trmY | Protein of unknown function DUF358; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family. (200 aa) |
| | pus10 | tRNA pseudouridine 55 synthase Archaea; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. (431 aa) |
| | AKB20076.1 | Putative ribosomal RNA small subunit methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (184 aa) |
| | AKB20083.1 | Mobile element protein. (153 aa) |
| | AKB20115.1 | S-adenosyl-L-methionine-binding protein. (144 aa) |
| | AKB20125.1 | DNA helicase related protein. (1665 aa) |
| | pylS | Pyrrolysyl-tRNA synthetase; Catalyzes the attachment of pyrrolysine to tRNA(Pyl). Pyrrolysine is a lysine derivative encoded by the termination codon UAG. (477 aa) |
| | priL | DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. (358 aa) |
| | AKB20194.1 | Hypothetical protein. (155 aa) |
| | AKB20199.1 | Glycyl-tRNA synthetase. (613 aa) |
| | AKB20200.1 | ATP-dependent RNA helicase, EIF-4A family. (806 aa) |
| | sepS | O-phosphoseryl-tRNA(Cys) synthetase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys). (539 aa) |
| | mutS2 | DNA mismatch repair protein; Has ATPase and non-specific DNA-binding activities. Belongs to the DNA mismatch repair MutS family. Archaeal Muts2 subfamily. (707 aa) |
| | radB | DNA repair and recombination protein RadB; Involved in DNA repair and in homologous recombination. May regulate the cleavage reactions of the branch-structured DNA. Has a very weak ATPase activity that is not stimulated by DNA. Binds DNA but does not promote DNA strands exchange. (237 aa) |
| | argS | Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (569 aa) |
| | taw1 | Fe-S OXIDOREDUCTASE Wyeosine biosynthesis; Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe). (345 aa) |
| | polB | Archaeal DNA polymerase II small subunit; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family. (680 aa) |
| | AKB20242.1 | tRNA dihydrouridine synthase B. (323 aa) |
| | AKB20270.1 | Mobile element protein. (153 aa) |
