(4 nodes) ABC-type glycine betaine transport system, substrate-binding domain network (Methanococcoides methylutens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AKB85070.1	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC. (291 aa)
	AKB85071.1	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC. (291 aa)
	AKB85153.1	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation. (304 aa)
	AKB85162.1	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC. (302 aa)

Your Current Organism:

Methanococcoides methylutens

NCBI taxonomy Id: 1434104
Other names: M. methylutens MM1, Methanococcoides methylutens MM1

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB85070.1	AKB85071.1	MCMEM_1017	MCMEM_1018	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.945
AKB85070.1	AKB85153.1	MCMEM_1017	MCMEM_1100	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.	0.497
AKB85070.1	AKB85162.1	MCMEM_1017	MCMEM_1109	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.904
AKB85071.1	AKB85070.1	MCMEM_1018	MCMEM_1017	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.945
AKB85071.1	AKB85153.1	MCMEM_1018	MCMEM_1100	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.	0.497
AKB85071.1	AKB85162.1	MCMEM_1018	MCMEM_1109	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.901
AKB85153.1	AKB85070.1	MCMEM_1100	MCMEM_1017	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.497
AKB85153.1	AKB85071.1	MCMEM_1100	MCMEM_1018	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.497
AKB85153.1	AKB85162.1	MCMEM_1100	MCMEM_1109	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.497
AKB85162.1	AKB85070.1	MCMEM_1109	MCMEM_1017	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.904
AKB85162.1	AKB85071.1	MCMEM_1109	MCMEM_1018	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	0.901
AKB85162.1	AKB85153.1	MCMEM_1109	MCMEM_1100	Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC.	L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.	0.497