STRINGSTRING
AKB82517.1 AKB82517.1 AKB80670.1 AKB80670.1 AKB80671.1 AKB80671.1 AKB80712.1 AKB80712.1 AKB80845.1 AKB80845.1 AKB80998.1 AKB80998.1 ileS ileS AKB81144.1 AKB81144.1 AKB81220.1 AKB81220.1 AKB81373.1 AKB81373.1 AKB81393.1 AKB81393.1 AKB81413.1 AKB81413.1 thiI thiI AKB81496.1 AKB81496.1 AKB81602.1 AKB81602.1 AKB81610.1 AKB81610.1 argG argG AKB81747.1 AKB81747.1 thiI-2 thiI-2 nadE nadE coaD coaD valS valS tyrS tyrS cysS cysS lysS-2 lysS-2 gltX gltX AKB82697.1 AKB82697.1 AKB82733.1 AKB82733.1 trpS trpS AKB82844.1 AKB82844.1 AKB82845.1 AKB82845.1 ribL ribL leuS leuS queC queC AKB83351.1 AKB83351.1 AKB83360.1 AKB83360.1 AKB83361.1 AKB83361.1 AKB83556.1 AKB83556.1 AKB83591.1 AKB83591.1 AKB83625.1 AKB83625.1 metG metG AKB83656.1 AKB83656.1 guaAB guaAB argS argS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKB82517.1Photolyase protein family. (539 aa)
AKB80670.1Universal stress protein. (154 aa)
AKB80671.1Universal stress protein. (151 aa)
AKB80712.1Universal stress protein. (128 aa)
AKB80845.1Hypothetical protein; COG2102: Predicted ATPases of PP-loop superfamily; IPR002761: Domain of unknown function DUF71. (223 aa)
AKB80998.1Universal stress protein. (149 aa)
ileSIsoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily. (1058 aa)
AKB81144.1Universal stress protein. (157 aa)
AKB81220.1Universal stress protein. (147 aa)
AKB81373.1Universal stress protein. (156 aa)
AKB81393.1PUA-PAPS reductase like fusion. (797 aa)
AKB81413.1ATP-utilizing enzymes of the PP-loop superfamily. (265 aa)
thiItRNA S(4)U 4-thiouridine synthase (former ThiI); Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (405 aa)
AKB81496.1Universal stress protein. (157 aa)
AKB81602.1Asparagine synthetase (glutamine-hydrolyzing). (488 aa)
AKB81610.1N-type ATP pyrophosphatase superfamily; TilS and TtcA-like. (302 aa)
argGArgininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (395 aa)
AKB81747.1Asparagine synthetase (glutamine-hydrolyzing). (633 aa)
thiI-2tRNA S(4)U 4-thiouridine synthase (former ThiI); Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (436 aa)
nadENAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. (275 aa)
coaDPhosphopantetheine adenylyltransferase, type II eukaryotic; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the eukaryotic CoaD family. (161 aa)
valSValyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily. (869 aa)
tyrSTyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily. (317 aa)
cysSCysteinyl-tRNA synthetase. (473 aa)
lysS-2Lysyl-tRNA synthetase (class I); Belongs to the class-I aminoacyl-tRNA synthetase family. (537 aa)
gltXGlutamyl-tRNA synthetase / Glutamyl-tRNA(Gln) synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (571 aa)
AKB82697.1ATP-utilizing enzyme of the PP-loop superfamily. (272 aa)
AKB82733.1Universal stress protein. (153 aa)
trpSTryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). (491 aa)
AKB82844.1Universal stress protein. (163 aa)
AKB82845.1Universal stress protein. (148 aa)
ribLFMN adenylyltransferase, type 3 archaeal; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (139 aa)
leuSLeucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (966 aa)
queCQueuosine Biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (231 aa)
AKB83351.1Nicotinamide-nucleotide adenylyltransferase, NadM family. (173 aa)
AKB83360.1Hypothetical protein. (345 aa)
AKB83361.1NAD synthetase. (330 aa)
AKB83556.1ATP-utilizing enzymes of the PP-loop superfamily protein. (203 aa)
AKB83591.1Universal stress protein. (150 aa)
AKB83625.1Deoxyribodipyrimidine photolyase, type II. (462 aa)
metGMethionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (711 aa)
AKB83656.1PUA-PAPS reductase like fusion. (634 aa)
guaABGMP synthase (glutamine-hydrolyzing), ATP pyrophosphatase subunit; Catalyzes the synthesis of GMP from XMP. (305 aa)
argSArginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (569 aa)
Your Current Organism:
Methanosarcina barkeri 3
NCBI taxonomy Id: 1434107
Other names: M. barkeri 3
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