STRINGSTRING
AKB82678.1 AKB82678.1 AKB82126.1 AKB82126.1 AKB81342.1 AKB81342.1 AKB80603.1 AKB80603.1 AKB83104.1 AKB83104.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKB82678.1G:T/U mismatch-specific uracil/thymine DNA-glycosylase. (159 aa)
AKB82126.1Archaeosine tRNA-ribosyltransferase type 2 short. (227 aa)
AKB81342.1Hypothetical protein. (202 aa)
AKB80603.1Archaeosine tRNA-ribosyltransferase type 2. (626 aa)
AKB83104.1Uracil-DNA glycosylase, family 4. (180 aa)
Your Current Organism:
Methanosarcina barkeri 3
NCBI taxonomy Id: 1434107
Other names: M. barkeri 3
Server load: low (26%) [HD]