(6 nodes) Small ribosomal subunit network (Methanosarcina siciliae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps5	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy. (209 aa)
	rps3ae	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. (203 aa)
	rps19p	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (136 aa)
	rps24e	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. (101 aa)
	rps19e	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (149 aa)
	rps17e	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family. (64 aa)

Your Current Organism:

Methanosarcina siciliae

NCBI taxonomy Id: 1434118
Other names: M. siciliae C2J, Methanosarcina siciliae C2J

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rps17e	rps19e	MSSAC_4214	MSSAC_3946	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rps17e	rps19p	MSSAC_4214	MSSAC_3419	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rps17e	rps24e	MSSAC_4214	MSSAC_3525	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rps17e	rps3ae	MSSAC_4214	MSSAC_2359	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rps17e	rps5	MSSAC_4214	MSSAC_3403	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
rps19e	rps17e	MSSAC_3946	MSSAC_4214	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rps19e	rps19p	MSSAC_3946	MSSAC_3419	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rps19e	rps24e	MSSAC_3946	MSSAC_3525	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rps19e	rps3ae	MSSAC_3946	MSSAC_2359	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rps19e	rps5	MSSAC_3946	MSSAC_3403	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
rps19p	rps17e	MSSAC_3419	MSSAC_4214	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rps19p	rps19e	MSSAC_3419	MSSAC_3946	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rps19p	rps24e	MSSAC_3419	MSSAC_3525	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rps19p	rps3ae	MSSAC_3419	MSSAC_2359	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rps19p	rps5	MSSAC_3419	MSSAC_3403	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
rps24e	rps17e	MSSAC_3525	MSSAC_4214	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rps24e	rps19e	MSSAC_3525	MSSAC_3946	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rps24e	rps19p	MSSAC_3525	MSSAC_3419	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	SSU ribosomal protein S15e (S19p); Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rps24e	rps3ae	MSSAC_3525	MSSAC_2359	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999
rps24e	rps5	MSSAC_3525	MSSAC_3403	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999