STRINGSTRING
rfcL rfcL AHC50534.1 AHC50534.1 AHC50547.1 AHC50547.1 AHC50549.1 AHC50549.1 AHC50550.1 AHC50550.1 nep1 nep1 AHC50571.1 AHC50571.1 rad50 rad50 mre11 mre11 AHC50596.1 AHC50596.1 dnaG dnaG rps13 rps13 rps4 rps4 rps11 rps11 rpl18e rpl18e rpl13 rpl13 rps9 rps9 rps2 rps2 AHC50611.1 AHC50611.1 AHC50623.1 AHC50623.1 AHC50624.1 AHC50624.1 AHC50628.1 AHC50628.1 AHC50648.1 AHC50648.1 AHC50681.1 AHC50681.1 rpl10e rpl10e AHC50702.1 AHC50702.1 AHC50720.1 AHC50720.1 AHC50743.1 AHC50743.1 AHC50748.1 AHC50748.1 AHC50753.1 AHC50753.1 AHC50762.1 AHC50762.1 hel308 hel308 AHC50773.1 AHC50773.1 AHC50783.1 AHC50783.1 AHC50788.1 AHC50788.1 AHC50790.1 AHC50790.1 AHC50791.1 AHC50791.1 AHC50793.1 AHC50793.1 AHC50800.1 AHC50800.1 AHC50813.1 AHC50813.1 AHC50815.1 AHC50815.1 AHC50864.1 AHC50864.1 AHC52418.1 AHC52418.1 AHC52419.1 AHC52419.1 AHC52420.1 AHC52420.1 AHC50930.1 AHC50930.1 AHC50938.1 AHC50938.1 AHC50952.1 AHC50952.1 AHC50957.1 AHC50957.1 AHC50962.1 AHC50962.1 rpl34e rpl34e rpl15 rpl15 rpl30 rpl30 rps5 rps5 rpl18 rpl18 rpl19e rpl19e rpl32e rpl32e rpl6 rpl6 AHC50988.1 AHC50988.1 rps14P rps14P rpl5 rpl5 rps4e rps4e rpl24 rpl24 rpl14 rpl14 rps17 rps17 rpl29 rpl29 rps3 rps3 rpl22 rpl22 rps19p rps19p rpl2p rpl2p rpl23 rpl23 rpl4lp rpl4lp rpl3 rpl3 AHC51004.1 AHC51004.1 AHC51008.1 AHC51008.1 AHC51010.1 AHC51010.1 AHC51013.1 AHC51013.1 rpl37ae rpl37ae AHC51018.1 AHC51018.1 rpl15e rpl15e rps3ae rps3ae rpl21e rpl21e rpl37e rpl37e AHC51040.1 AHC51040.1 tfe tfe AHC51044.1 AHC51044.1 AHC51049.1 AHC51049.1 AHC51053.1 AHC51053.1 rps17e rps17e AHC51059.1 AHC51059.1 rps10p rps10p rps7 rps7 rps12 rps12 rpl30e rpl30e rpl24e rpl24e rps28e rps28e gatB gatB AHC51092.1 AHC51092.1 AHC51098.1 AHC51098.1 AHC51100.1 AHC51100.1 rps8e rps8e AHC51123.1 AHC51123.1 fen fen hemA hemA AHC51139.1 AHC51139.1 AHC51144.1 AHC51144.1 AHC51161.1 AHC51161.1 AHC51162.1 AHC51162.1 rpl14e rpl14e rps15 rps15 cbiX cbiX rps6e rps6e AHC51182.1 AHC51182.1 AHC51189.1 AHC51189.1 AHC51199.1 AHC51199.1 rps24e rps24e thi4 thi4 ubiX ubiX endA endA sav3 sav3 AHC51235.1 AHC51235.1 AHC51244.1 AHC51244.1 rfc rfc AHC51254.1 AHC51254.1 AHC51268.1 AHC51268.1 AHC51272.1 AHC51272.1 AHC51302.1 AHC51302.1 AHC51311.1 AHC51311.1 AHC51335.1 AHC51335.1 AHC51350.1 AHC51350.1 AHC51352.1 AHC51352.1 AHC51388.1 AHC51388.1 AHC51393.1 AHC51393.1 AHC51445.1 AHC51445.1 AHC51446.1 AHC51446.1 AHC51466.1 AHC51466.1 AHC51486.1 AHC51486.1 AHC51496.1 AHC51496.1 AHC51503.1 AHC51503.1 AHC51514.1 AHC51514.1 AHC51529.1 AHC51529.1 AHC51531.1 AHC51531.1 AHC51537.1 AHC51537.1 AHC51552.1 AHC51552.1 rps27e rps27e rpl44e rpl44e priS priS AHC51559.1 AHC51559.1 rnz rnz AHC51579.1 AHC51579.1 top6A top6A top6B top6B AHC51588.1 AHC51588.1 albA albA AHC51594.1 AHC51594.1 tbp tbp AHC51607.1 AHC51607.1 trm1 trm1 AHC51615.1 AHC51615.1 AHC51624.1 AHC51624.1 AHC51631.1 AHC51631.1 AHC51633.1 AHC51633.1 AHC51672.1 AHC51672.1 rpl12p rpl12p rpl10 rpl10 rpl1 rpl1 rpl11 rpl11 spt5 spt5 rplX rplX AHC51704.1 AHC51704.1 rpl39e rpl39e rps19e rps19e AHC51732.1 AHC51732.1 AHC51749.1 AHC51749.1 rpl7ae rpl7ae AHC51755.1 AHC51755.1 AHC51757.1 AHC51757.1 priL priL AHC51762.1 AHC51762.1 AHC51771.1 AHC51771.1 AHC51780.1 AHC51780.1 AHC52543.1 AHC52543.1 AHC51820.1 AHC51820.1 AHC51860.1 AHC51860.1 AHC51866.1 AHC51866.1 AHC51871.1 AHC51871.1 AHC51953.1 AHC51953.1 AHC52154.1 AHC52154.1 AHC52167.1 AHC52167.1 AHC52175.1 AHC52175.1 AHC52210.1 AHC52210.1 AHC52237.1 AHC52237.1 AHC52238.1 AHC52238.1 AHC52241.1 AHC52241.1 AHC52243.1 AHC52243.1 AHC52315.1 AHC52315.1 AHC52321.1 AHC52321.1 thyX thyX nac nac AHC52369.1 AHC52369.1 AHC52376.1 AHC52376.1 AHC52380.1 AHC52380.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rfcLReplication protein C; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. (437 aa)
AHC50534.1Cell division control protein Cdc6; Involved in regulation of DNA replication. (386 aa)
AHC50547.1Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
AHC50549.1DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
AHC50550.12-haloalkanoic acid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
nep116S rRNA methyltransferase; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA. (219 aa)
AHC50571.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
rad50Double-stranded DNA repair protein Rad50; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50/Mre11 complex; Belongs to the SMC family. RAD50 subfamily. (886 aa)
mre11Metallophosphoesterase; Part of the Rad50/Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single-stranded endonuclease activity. Belongs to the MRE11/RAD32 family. (382 aa)
AHC50596.1DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (782 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Also part of the exosome, which is a complex involved in RNA degradation. Acts as a poly(A)-binding protein that enhances the interaction between heteropolymeric, adenine-rich transcripts and the exosome. (412 aa)
rps1330S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. (170 aa)
rps430S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (176 aa)
rps1130S ribosomal protein S11; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. (132 aa)
rpl18e50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL18 family. (118 aa)
rpl1350S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (148 aa)
rps930S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. (138 aa)
rps230S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (225 aa)
AHC50611.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MEMO1 family. (284 aa)
AHC50623.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
AHC50624.150S ribosomal protein L11 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
AHC50628.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AHC50648.1Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
AHC50681.1DNA-directed RNA polymerase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (111 aa)
rpl10e50S ribosomal protein L16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL16 family. (176 aa)
AHC50702.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
AHC50720.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
AHC50743.12-haloalkanoic acid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AHC50748.1Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. (280 aa)
AHC50753.1Septum site-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
AHC50762.1Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
hel308DEAD/DEAH box helicase; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks. (705 aa)
AHC50773.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AHC50783.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (746 aa)
AHC50788.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
AHC50790.1Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
AHC50791.1Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
AHC50793.14Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
AHC50800.1Haloacetate dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
AHC50813.1Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (609 aa)
AHC50815.14Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
AHC50864.1CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
AHC52418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (66 aa)
AHC52419.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (51 aa)
AHC52420.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (57 aa)
AHC50930.1Adenylate kinase; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Belongs to the adenylate kinase family. AK6 subfamily. (189 aa)
AHC50938.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
AHC50952.1Translation initiation factor IF-2B subunit alpha; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the EIF-2B alpha/beta/delta subunits family. MtnA subfamily. (360 aa)
AHC50957.1Circadian clock protein KaiC; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
AHC50962.1TATA binding protein (TBP)-interacting protein (TIP49); Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
rpl34e50S ribosomal protein L34; The function of this protein in the ribosome is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL34 family. (87 aa)
rpl1550S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (144 aa)
rpl3050S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
rps530S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. (214 aa)
rpl1850S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (197 aa)
rpl19e50S ribosomal protein L19; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. (150 aa)
rpl32e50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL32 family. (131 aa)
rpl650S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. (186 aa)
AHC50988.130S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS8 family. (133 aa)
rps14P30S ribosomal protein S14; Located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the archaeal forms appear to contain the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
rpl550S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (178 aa)
rps4e30S ribosomal protein S4; The function of this ribosomal subunit is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
rpl2450S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. (134 aa)
rpl1450S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (138 aa)
rps1730S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (114 aa)
rpl2950S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. (69 aa)
rps330S ribosomal protein S3; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family. (231 aa)
rpl2250S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (156 aa)
rps19p30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (140 aa)
rpl2p50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (238 aa)
rpl2350S ribosomal protein L23; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. (81 aa)
rpl4lp50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. (266 aa)
rpl350S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (342 aa)
AHC51004.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AHC51008.12-haloalkanoic acid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
AHC51010.1Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
AHC51013.1Brix domain-containing protein; Probably involved in the biogenesis of the ribosome. (182 aa)
rpl37ae50S ribosomal protein L37; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. Putative zinc-binding subfamily. (70 aa)
AHC51018.1Shwachman#Bodian#Diamond syndrome protein family; SBDS; similar to eukaryotic proteins involved in RNA metabolism or binding; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
rpl15e50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL15 family. (217 aa)
rps3ae30S ribosomal protein S3; The function for this protein is unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS1 family. (197 aa)
rpl21e50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL21 family. (103 aa)
rpl37e50S ribosomal protein L37; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL37 family. (61 aa)
AHC51040.1Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (319 aa)
tfeTranscription factor; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to [...] (179 aa)
AHC51044.1XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
AHC51049.1Sm ribonucleo; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
AHC51053.1tRNA-splicing endonuclease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
rps17e30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS17 family. (82 aa)
AHC51059.1ATPase; Originally found to be an inhibitor of the antiviral RNase-L in human cells; contains ABC-type nucleotide binding domains; putatively functions in RNA maturation; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
rps10p30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
rps730S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. (195 aa)
rps1230S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. (147 aa)
rpl30e50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL30 family. (104 aa)
rpl24e50S ribosomal protein L24; Binds to the 23S rRNA. (62 aa)
rps28e30S ribosomal protein S28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS28 family. (84 aa)
gatBglutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily. (472 aa)
AHC51092.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
AHC51098.1Cell division control protein Cdc6; Involved in regulation of DNA replication. (397 aa)
AHC51100.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
rps8e30S ribosomal protein S8; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
AHC51123.150S ribosomal protein L40; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL40 family. (56 aa)
fenEndonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as [...] (302 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (414 aa)
AHC51139.1RNA procession exonuclease-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
AHC51144.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
AHC51161.1Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
AHC51162.1tRNA pseudouridine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)
rpl14e50S ribosomal protein L14; Binds 50S subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eL14 family. (96 aa)
rps1530S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
cbiXSirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Belongs to the CbiX family. CbiXS subfamily. (123 aa)
rps6e30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS6 family. (213 aa)
AHC51182.1Nucleotide binding protein PINc; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
AHC51189.130S ribosomal protein S25; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
AHC51199.130S ribosomal protein S27; Derived by automated computational analysis using gene prediction method: Protein Homology. (67 aa)
rps24e30S ribosomal protein S24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eukaryotic ribosomal protein eS24 family. (118 aa)
thi4Ribulose-1,5-biphosphate synthetase; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur. (261 aa)
ubiXAromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (220 aa)
endAtRNA-splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. (181 aa)
sav3ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. (590 aa)
AHC51235.1GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
AHC51244.1Cell division control protein Cdc6; Involved in regulation of DNA replication. (418 aa)
rfcATPase AAA; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. (325 aa)
AHC51254.1uroporphyrin-III C-methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
AHC51268.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)
AHC51272.16-pyruvoyl tetrahydrobiopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
AHC51302.1RNA-processing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
AHC51311.1Single-stranded DNA-binding protein; In Sulfolobus solfataricus this protein plays a role in promoter opening and RNA polymerase recruitment under specific conditions; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AHC51335.1RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
AHC51350.14-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (429 aa)
AHC51352.1Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
AHC51388.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AHC51393.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (348 aa)
AHC51445.1Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
AHC51446.1TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
AHC51466.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)
AHC51486.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
AHC51496.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
AHC51503.1Aconitate hydratase; Catalyzes the conversion of citrate to isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (848 aa)
AHC51514.1Deoxyribodipyrimidine photo-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family. (430 aa)
AHC51529.1GHMP kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
AHC51531.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
AHC51537.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
AHC51552.1Ribosome biogenesis protein Nop10; Derived by automated computational analysis using gene prediction method: Protein Homology. (56 aa)
rps27e30S ribosomal protein S27; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)
rpl44e50S ribosomal protein L44; Binds to the 23S rRNA. (95 aa)
priSDNA primase; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play [...] (322 aa)
AHC51559.1GTPase; Homodimeric GPN-loop GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
rnzRibonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. (292 aa)
AHC51579.1Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
top6ADNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family. (386 aa)
top6BDNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity. (532 aa)
AHC51588.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
albADNA-binding protein; Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes; Belongs to the histone-like Alba family. (97 aa)
AHC51594.1DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (542 aa)
tbpTATA-box-binding protein; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. (166 aa)
AHC51607.1H/ACA RNA-protein complex protein Gar1; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
trm1N2,N2-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. (382 aa)
AHC51615.130S ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
AHC51624.13-hydroxy-3-methylglutaryl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family. (411 aa)
AHC51631.1Hydrogenase expression protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
AHC51633.1DNA topoisomerase I; Decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
AHC51672.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
rpl12p50S ribosomal protein L12; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the eukaryotic ribosomal protein P1/P2 family. (105 aa)
rpl10Acetoin utilization protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (335 aa)
rpl150S ribosomal protein L1; Binds directly to 23S rRNA. Probably involved in E site tRNA release. (221 aa)
rpl1150S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors; Belongs to the universal ribosomal protein uL11 family. (170 aa)
spt5Transcription antitermination protein NusG; Stimulates transcription elongation; Belongs to the archaeal Spt5 family. (152 aa)
rplX50S ribosomal protein LX; This protein is unique to archaeal ribosomes; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
AHC51704.150S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
rpl39e50S ribosomal protein L39; Part of the polypeptide exit tunnel in the 50S ribosomal complex; Derived by automated computational analysis using gene prediction method: Protein Homology. (51 aa)
rps19e30S ribosomal protein S19; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family. (154 aa)
AHC51732.1Endonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
AHC51749.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
rpl7ae50S ribosomal protein L7; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. (126 aa)
AHC51755.1Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein has been shown to be aphidicolin resistant and stable up to 80#C; Derived by automated computational analysis using gene prediction method: Protein Homology. (876 aa)
AHC51757.150S ribosomal protein L11 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
priLDNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. (299 aa)
AHC51762.1ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (701 aa)
AHC51771.130S ribosomal protein S26; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)
AHC51780.1GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (259 aa)
AHC52543.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (169 aa)
AHC51820.1GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
AHC51860.1Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
AHC51866.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
AHC51871.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
AHC51953.12-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
AHC52154.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)
AHC52167.12-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
AHC52175.1DNA polymerase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)
AHC52210.1uroporphyrin-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
AHC52237.1CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
AHC52238.1CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
AHC52241.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
AHC52243.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
AHC52315.12-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
AHC52321.1Pterin-4-alpha-carbinolamine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
thyXThymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (260 aa)
nacNagC family transcriptional regulator; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. (116 aa)
AHC52369.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
AHC52376.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AHC52380.1Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
Your Current Organism:
Sulfolobus acidocaldarius SUSAZ
NCBI taxonomy Id: 1435377
Other names: S. acidocaldarius SUSAZ
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