18 items (Sulfolobus acidocaldarius SUSAZ) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AHC50690.1	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
	AHC50691.1	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
	AHC50716.1	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
	AHC50717.1	2-oxoacid:ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (627 aa)
	AHC51121.1	Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
	AHC51390.1	Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
	AHC51391.1	Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (415 aa)
	AHC51433.1	Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (558 aa)
	AHC51778.1	Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
	AHC51936.1	Benzoylformate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (483 aa)
	AHC52042.1	Pyruvate dehydrogenase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (549 aa)
	AHC52255.1	Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates. (611 aa)
	AHC52277.1	Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (397 aa)
	AHC52278.1	2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	AHC52280.1	Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (530 aa)
	AHC52304.1	Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
	AHC52328.1	2-oxoacid:ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa)
	AHC52329.1	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)

Your Current Organism:

Sulfolobus acidocaldarius SUSAZ

NCBI taxonomy Id: 1435377
Other names: S. acidocaldarius SUSAZ

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHC50690.1	AHC50691.1	SUSAZ_00910	SUSAZ_00915	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AHC50690.1	AHC50716.1	SUSAZ_00910	SUSAZ_01050	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50690.1	AHC50717.1	SUSAZ_00910	SUSAZ_01055	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid:ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AHC50690.1	AHC51390.1	SUSAZ_00910	SUSAZ_05070	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50690.1	AHC51391.1	SUSAZ_00910	SUSAZ_05075	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AHC50690.1	AHC52277.1	SUSAZ_00910	SUSAZ_10565	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AHC50690.1	AHC52278.1	SUSAZ_00910	SUSAZ_10570	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50690.1	AHC52328.1	SUSAZ_00910	SUSAZ_10840	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid:ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
AHC50690.1	AHC52329.1	SUSAZ_00910	SUSAZ_10845	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50691.1	AHC50690.1	SUSAZ_00915	SUSAZ_00910	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AHC50691.1	AHC50716.1	SUSAZ_00915	SUSAZ_01050	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50691.1	AHC50717.1	SUSAZ_00915	SUSAZ_01055	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid:ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AHC50691.1	AHC51390.1	SUSAZ_00915	SUSAZ_05070	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50691.1	AHC51391.1	SUSAZ_00915	SUSAZ_05075	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AHC50691.1	AHC52277.1	SUSAZ_00915	SUSAZ_10565	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AHC50691.1	AHC52278.1	SUSAZ_00915	SUSAZ_10570	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50691.1	AHC52328.1	SUSAZ_00915	SUSAZ_10840	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid:ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
AHC50691.1	AHC52329.1	SUSAZ_00915	SUSAZ_10845	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50716.1	AHC50690.1	SUSAZ_01050	SUSAZ_00910	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800
AHC50716.1	AHC50691.1	SUSAZ_01050	SUSAZ_00915	2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.800