29 items (Sulfolobus acidocaldarius SUSAZ) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AHC52253.1	Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
	AHC50559.1	ferredoxin--NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	AHC50583.1	Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
	AHC50853.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
	AHC50919.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
	AHC50920.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	AHC51087.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AHC51103.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
	AHC51112.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
	AHC51218.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
	AHC51270.1	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (323 aa)
	AHC51281.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (75 aa)
	AHC51325.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
	AHC51358.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
	AHC51359.1	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
	AHC51360.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (867 aa)
	AHC51389.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
	AHC51425.1	Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	AHC51427.1	Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
	AHC52503.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (368 aa)
	AHC51468.1	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	AHC51609.1	B-block binding subunit of TFIIIC; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)
	lrp	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
	AHC51867.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
	AHC51955.1	Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa)
	AHC52133.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
	AHC52153.1	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
	AHC52161.1	ferredoxin--NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	AHC52179.1	5-amino-6-(5-phosphoribosylamino)uracil reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)

Your Current Organism:

Sulfolobus acidocaldarius SUSAZ

NCBI taxonomy Id: 1435377
Other names: S. acidocaldarius SUSAZ

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHC50919.1	AHC50920.1	SUSAZ_02200	SUSAZ_02205	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AHC50919.1	AHC51358.1	SUSAZ_02200	SUSAZ_04800	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
AHC50919.1	AHC51359.1	SUSAZ_02200	SUSAZ_04805	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
AHC50919.1	AHC51360.1	SUSAZ_02200	SUSAZ_04810	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
AHC50920.1	AHC50919.1	SUSAZ_02205	SUSAZ_02200	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AHC50920.1	AHC51358.1	SUSAZ_02205	SUSAZ_04800	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AHC50920.1	AHC51360.1	SUSAZ_02205	SUSAZ_04810	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
AHC51103.1	AHC51112.1	SUSAZ_03305	SUSAZ_03370	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AHC51103.1	AHC51281.1	SUSAZ_03305	SUSAZ_04330	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
AHC51103.1	AHC51325.1	SUSAZ_03305	SUSAZ_04565	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AHC51103.1	AHC51389.1	SUSAZ_03305	SUSAZ_05065	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.518
AHC51103.1	AHC52153.1	SUSAZ_03305	SUSAZ_09745	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AHC51103.1	lrp	SUSAZ_03305	SUSAZ_07510	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AHC51112.1	AHC51103.1	SUSAZ_03370	SUSAZ_03305	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
AHC51112.1	AHC51281.1	SUSAZ_03370	SUSAZ_04330	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AHC51270.1	AHC51468.1	SUSAZ_04265	SUSAZ_05565	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thioredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.909
AHC51281.1	AHC51103.1	SUSAZ_04330	SUSAZ_03305	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.524
AHC51281.1	AHC51112.1	SUSAZ_04330	SUSAZ_03370	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AHC51281.1	AHC51325.1	SUSAZ_04330	SUSAZ_04565	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428
AHC51281.1	AHC51389.1	SUSAZ_04330	SUSAZ_05065	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.428