STRINGSTRING
AHC50547.1 AHC50547.1 AHC50648.1 AHC50648.1 AHC50674.1 AHC50674.1 fen fen lig lig pcn pcn pcn-2 pcn-2 pcn-3 pcn-3 AHC51732.1 AHC51732.1 AHC51947.1 AHC51947.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AHC50547.1Derived by automated computational analysis using gene prediction method: Protein Homology. (277 aa)
AHC50648.1Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
AHC50674.1DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
fenEndonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as [...] (302 aa)
ligATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (598 aa)
pcnDNA polymerase; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family. (250 aa)
pcn-2DNA polymerase; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. (247 aa)
pcn-3DNA polymerase; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family. (245 aa)
AHC51732.1Endonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
AHC51947.1uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
Your Current Organism:
Sulfolobus acidocaldarius SUSAZ
NCBI taxonomy Id: 1435377
Other names: S. acidocaldarius SUSAZ
Server load: low (14%) [HD]