29 items (Pseudogymnoascus sp. VKMF3557) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V490_04150	Trafficking protein particle complex subunit BET3. (189 aa)
	V490_08406	Uncharacterized protein. (197 aa)
	V490_08204	Uncharacterized protein. (227 aa)
	V490_07691	Protein kinase domain-containing protein. (962 aa)
	V490_09098	RRM domain-containing protein. (130 aa)
	V490_07131	Autophagy-related protein. (121 aa)
	V490_07660	Uncharacterized protein. (329 aa)
	V490_06044	Uncharacterized protein. (225 aa)
	V490_06048	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	V490_08319	Uncharacterized protein. (770 aa)
	V490_04684	Uncharacterized protein. (775 aa)
	V490_07814	Uncharacterized protein. (389 aa)
	V490_04505	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy. (146 aa)
	V490_07070	Uncharacterized protein. (1535 aa)
	V490_04671	Uncharacterized protein. (209 aa)
	V490_03866	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (882 aa)
	V490_01891	Uncharacterized protein. (876 aa)
	V490_01767	Phosphatidylinositol 3-kinase VPS34. (911 aa)
	V490_04125	Uncharacterized protein; Belongs to the AAA ATPase family. (823 aa)
	V490_00883	Uncharacterized protein. (251 aa)
	V490_03616	Uncharacterized protein. (231 aa)
	V490_01486	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. (943 aa)
	V490_02777	Uncharacterized protein. (201 aa)
	V490_00105	E3 ubiquitin-protein ligase. (816 aa)
	V490_08241	Nudix hydrolase domain-containing protein. (571 aa)
	V490_07659	Uncharacterized protein. (124 aa)
	V490_05498	Uncharacterized protein. (192 aa)
	V490_04326	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. (157 aa)
	V490_02050	Uncharacterized protein. (119 aa)

Your Current Organism:

Pseudogymnoascus sp. VKMF3557

NCBI taxonomy Id: 1437433
Other names: P. sp. VKM F-3557, Pseudogymnoascus sp. VKM F-3557

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V490_00105	V490_04125	A0A093YF30	A0A093Y7D9	E3 ubiquitin-protein ligase.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.478
V490_00105	V490_06048	A0A093YF30	A0A093XKU1	E3 ubiquitin-protein ligase.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.453
V490_00105	V490_07131	A0A093YF30	A0A093X9G1	E3 ubiquitin-protein ligase.	Autophagy-related protein.	0.462
V490_00105	V490_09098	A0A093YF30	A0A093X7D4	E3 ubiquitin-protein ligase.	RRM domain-containing protein.	0.433
V490_00883	V490_01486	A0A093Y903	A0A093YBE3	Uncharacterized protein.	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	0.852
V490_00883	V490_01767	A0A093Y903	A0A093Y3D5	Uncharacterized protein.	Phosphatidylinositol 3-kinase VPS34.	0.872
V490_00883	V490_03616	A0A093Y903	A0A093YAE7	Uncharacterized protein.	Uncharacterized protein.	0.545
V490_00883	V490_03866	A0A093Y903	A0A093XY38	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.579
V490_00883	V490_04326	A0A093Y903	A0A094A907	Uncharacterized protein.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.581
V490_00883	V490_04505	A0A093Y903	A0A093XN42	Uncharacterized protein.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.691
V490_00883	V490_07070	A0A093Y903	A0A093XRK9	Uncharacterized protein.	Uncharacterized protein.	0.871
V490_00883	V490_07131	A0A093Y903	A0A093X9G1	Uncharacterized protein.	Autophagy-related protein.	0.705
V490_00883	V490_07691	A0A093Y903	A0A093X6Y6	Uncharacterized protein.	Protein kinase domain-containing protein.	0.940
V490_01486	V490_00883	A0A093YBE3	A0A093Y903	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Uncharacterized protein.	0.852
V490_01486	V490_01767	A0A093YBE3	A0A093Y3D5	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Phosphatidylinositol 3-kinase VPS34.	0.758
V490_01486	V490_03616	A0A093YBE3	A0A093YAE7	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Uncharacterized protein.	0.653
V490_01486	V490_03866	A0A093YBE3	A0A093XY38	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.920
V490_01486	V490_04326	A0A093YBE3	A0A094A907	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.	0.516
V490_01486	V490_04505	A0A093YBE3	A0A093XN42	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.	0.418
V490_01486	V490_07070	A0A093YBE3	A0A093XRK9	Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.	Uncharacterized protein.	0.756