Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APT88347.1 | APT88348.1 | CFRA_02600 | CFRA_02605 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APT88347.1 | APT88377.1 | CFRA_02600 | CFRA_02790 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.832 |
| APT88347.1 | APT88479.1 | CFRA_02600 | CFRA_03400 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. | 0.929 |
| APT88347.1 | aspA | CFRA_02600 | CFRA_04070 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate ammonia-lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.867 |
| APT88347.1 | glcB | CFRA_02600 | CFRA_04320 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.813 |
| APT88347.1 | mdh | CFRA_02600 | CFRA_09100 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.938 |
| APT88347.1 | mqo | CFRA_02600 | CFRA_07335 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.817 |
| APT88347.1 | pckG | CFRA_02600 | CFRA_10895 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.831 |
| APT88347.1 | ppc | CFRA_02600 | CFRA_05490 | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.807 |
| APT88348.1 | APT88347.1 | CFRA_02605 | CFRA_02600 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APT88348.1 | APT88377.1 | CFRA_02605 | CFRA_02790 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.831 |
| APT88348.1 | APT88479.1 | CFRA_02605 | CFRA_03400 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family. | 0.930 |
| APT88348.1 | aspA | CFRA_02605 | CFRA_04070 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aspartate ammonia-lyase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.867 |
| APT88348.1 | glcB | CFRA_02605 | CFRA_04320 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.813 |
| APT88348.1 | mdh | CFRA_02605 | CFRA_09100 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.938 |
| APT88348.1 | mqo | CFRA_02605 | CFRA_07335 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.816 |
| APT88348.1 | pckG | CFRA_02605 | CFRA_10895 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family. | 0.831 |
| APT88348.1 | ppc | CFRA_02605 | CFRA_05490 | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.807 |
| APT88377.1 | APT88347.1 | CFRA_02790 | CFRA_02600 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Fumarate hydrolyase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.832 |
| APT88377.1 | APT88348.1 | CFRA_02790 | CFRA_02605 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.831 |
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