STRINGSTRING
IM53_007960 IM53_007960 IM53_011745 IM53_011745 IM53_010695 IM53_010695 ntrC ntrC IM53_012535 IM53_012535 IM53_005025 IM53_005025 IM53_005545 IM53_005545 IM53_000940 IM53_000940
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IM53_007960Unannotated protein. (494 aa)
IM53_011745Unannotated protein. (447 aa)
IM53_010695Unannotated protein. (427 aa)
ntrCUnannotated protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes. (475 aa)
IM53_012535Unannotated protein. (448 aa)
IM53_005025Unannotated protein. (597 aa)
IM53_005545Unannotated protein. (464 aa)
IM53_000940Unannotated protein. (549 aa)
Your Current Organism:
Xanthomonas phaseoli
NCBI taxonomy Id: 1437877
Other names: X. phaseoli pv. dieffenbachiae LMG 695, Xanthomonas axonopodis pv. dieffenbachiae LMG 695, Xanthomonas phaseoli pv. dieffenbachiae LMG 695
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