(8 nodes) 2Fe-2S ferredoxin-like superfamily network (Xanthomonas phaseoli)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IM53_006995	Unannotated protein. (358 aa)
	IM53_002030	Unannotated protein. (319 aa)
	IM53_008900	Unannotated protein. (327 aa)
	IM53_019855	Unannotated protein. (216 aa)
	IM53_018835	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (744 aa)
	IM53_007805	Unannotated protein. (81 aa)
	IM53_017980	Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (260 aa)
	IM53_003530	Unannotated protein. (192 aa)

Your Current Organism:

Xanthomonas phaseoli

NCBI taxonomy Id: 1437877
Other names: X. phaseoli pv. dieffenbachiae LMG 695, Xanthomonas axonopodis pv. dieffenbachiae LMG 695, Xanthomonas phaseoli pv. dieffenbachiae LMG 695

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IM53_002030	IM53_006995	GCA_001564415_01099	GCA_001564415_00479	Unannotated protein.	Unannotated protein.	0.918
IM53_002030	IM53_007805	GCA_001564415_01099	GCA_001564415_02519	Unannotated protein.	Unannotated protein.	0.806
IM53_002030	IM53_008900	GCA_001564415_01099	GCA_001564415_01164	Unannotated protein.	Unannotated protein.	0.421
IM53_002030	IM53_018835	GCA_001564415_01099	GCA_001564415_02416	Unannotated protein.	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.	0.806
IM53_003530	IM53_019855	GCA_001564415_03831	GCA_001564415_02219	Unannotated protein.	Unannotated protein.	0.840
IM53_006995	IM53_002030	GCA_001564415_00479	GCA_001564415_01099	Unannotated protein.	Unannotated protein.	0.918
IM53_006995	IM53_007805	GCA_001564415_00479	GCA_001564415_02519	Unannotated protein.	Unannotated protein.	0.806
IM53_006995	IM53_008900	GCA_001564415_00479	GCA_001564415_01164	Unannotated protein.	Unannotated protein.	0.719
IM53_006995	IM53_018835	GCA_001564415_00479	GCA_001564415_02416	Unannotated protein.	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.	0.806
IM53_007805	IM53_002030	GCA_001564415_02519	GCA_001564415_01099	Unannotated protein.	Unannotated protein.	0.806
IM53_007805	IM53_006995	GCA_001564415_02519	GCA_001564415_00479	Unannotated protein.	Unannotated protein.	0.806
IM53_007805	IM53_017980	GCA_001564415_02519	GCA_001564415_02966	Unannotated protein.	Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.928
IM53_008900	IM53_002030	GCA_001564415_01164	GCA_001564415_01099	Unannotated protein.	Unannotated protein.	0.421
IM53_008900	IM53_006995	GCA_001564415_01164	GCA_001564415_00479	Unannotated protein.	Unannotated protein.	0.719
IM53_017980	IM53_007805	GCA_001564415_02966	GCA_001564415_02519	Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	Unannotated protein.	0.928
IM53_017980	IM53_018835	GCA_001564415_02966	GCA_001564415_02416	Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.	0.944
IM53_018835	IM53_002030	GCA_001564415_02416	GCA_001564415_01099	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.	Unannotated protein.	0.806
IM53_018835	IM53_006995	GCA_001564415_02416	GCA_001564415_00479	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.	Unannotated protein.	0.806
IM53_018835	IM53_017980	GCA_001564415_02416	GCA_001564415_02966	Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.	Unannotated protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.	0.944
IM53_019855	IM53_003530	GCA_001564415_02219	GCA_001564415_03831	Unannotated protein.	Unannotated protein.	0.840

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