(6 nodes) 2OG-Fe(II) oxygenase superfamily, and Amino acid permease network (Talaromyces atroroseus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UA08_06800	Fe2OG dioxygenase domain-containing protein. (941 aa)
	UA08_07110	AA_permease domain-containing protein. (540 aa)
	UA08_02162	Uncharacterized protein. (498 aa)
	UA08_07192	Fe2OG dioxygenase domain-containing protein. (338 aa)
	UA08_01055	Uncharacterized protein. (601 aa)
	UA08_02556	AA_permease domain-containing protein. (542 aa)

Your Current Organism:

Talaromyces atroroseus

NCBI taxonomy Id: 1441469
Other names: CBS 133442, DTO 178A4, IBT 32470, KAS 3778, T. atroroseus, Talaromyces atroroseus Yilmaz, Frisvad, Houbraken & Samson, 2013

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UA08_01055	UA08_06800	A0A225B1T9	A0A225AAA5	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.685
UA08_01055	UA08_07110	A0A225B1T9	A0A225APK8	Uncharacterized protein.	AA_permease domain-containing protein.	0.567
UA08_01055	UA08_07192	A0A225B1T9	A0A225AWG5	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.685
UA08_02162	UA08_02556	A0A225AUV6	A0A225B6I3	Uncharacterized protein.	AA_permease domain-containing protein.	0.465
UA08_02162	UA08_06800	A0A225AUV6	A0A225AAA5	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.685
UA08_02162	UA08_07110	A0A225AUV6	A0A225APK8	Uncharacterized protein.	AA_permease domain-containing protein.	0.567
UA08_02162	UA08_07192	A0A225AUV6	A0A225AWG5	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.685
UA08_02556	UA08_02162	A0A225B6I3	A0A225AUV6	AA_permease domain-containing protein.	Uncharacterized protein.	0.465
UA08_02556	UA08_06800	A0A225B6I3	A0A225AAA5	AA_permease domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.436
UA08_02556	UA08_07192	A0A225B6I3	A0A225AWG5	AA_permease domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.436
UA08_06800	UA08_01055	A0A225AAA5	A0A225B1T9	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.685
UA08_06800	UA08_02162	A0A225AAA5	A0A225AUV6	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.685
UA08_06800	UA08_02556	A0A225AAA5	A0A225B6I3	Fe2OG dioxygenase domain-containing protein.	AA_permease domain-containing protein.	0.436
UA08_06800	UA08_07110	A0A225AAA5	A0A225APK8	Fe2OG dioxygenase domain-containing protein.	AA_permease domain-containing protein.	0.436
UA08_07110	UA08_01055	A0A225APK8	A0A225B1T9	AA_permease domain-containing protein.	Uncharacterized protein.	0.567
UA08_07110	UA08_02162	A0A225APK8	A0A225AUV6	AA_permease domain-containing protein.	Uncharacterized protein.	0.567
UA08_07110	UA08_06800	A0A225APK8	A0A225AAA5	AA_permease domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.436
UA08_07110	UA08_07192	A0A225APK8	A0A225AWG5	AA_permease domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.436
UA08_07192	UA08_01055	A0A225AWG5	A0A225B1T9	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.685
UA08_07192	UA08_02162	A0A225AWG5	A0A225AUV6	Fe2OG dioxygenase domain-containing protein.	Uncharacterized protein.	0.685

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About