STRINGSTRING
UA08_09088 UA08_09088 UA08_04140 UA08_04140 UA08_04103 UA08_04103 UA08_01792 UA08_01792 UA08_07799 UA08_07799 UA08_06674 UA08_06674 UA08_06794 UA08_06794 UA08_06609 UA08_06609 UA08_03453 UA08_03453 UA08_08686 UA08_08686 UA08_06634 UA08_06634 UA08_07245 UA08_07245 UA08_05227 UA08_05227 UA08_03010 UA08_03010 UA08_02777 UA08_02777 UA08_03766 UA08_03766 UA08_00711 UA08_00711 UA08_00806 UA08_00806 UA08_02640 UA08_02640
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UA08_09088JmjC domain-containing histone demethylation protein 1. (1438 aa)
UA08_04140SCF E3 ubiquitin ligase complex F-box protein grrA. (514 aa)
UA08_04103Uncharacterized protein. (687 aa)
UA08_01792Putative E3 ubiquitin ligase complex SCF subunit sconB. (672 aa)
UA08_07799Uncharacterized protein. (338 aa)
UA08_06674NEDD8-activating enzyme E1 catalytic subunit. (423 aa)
UA08_06794NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
UA08_06609Cullin-associated NEDD8-dissociated protein 1, C-terminal part. (1335 aa)
UA08_03453CULLIN_2 domain-containing protein; Belongs to the cullin family. (823 aa)
UA08_08686Uncharacterized protein. (280 aa)
UA08_06634Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (291 aa)
UA08_07245NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. (544 aa)
UA08_05227F-box domain-containing protein. (1147 aa)
UA08_03010Uncharacterized protein. (709 aa)
UA08_02777E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. (159 aa)
UA08_03766Uncharacterized protein. (1094 aa)
UA08_00711Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. (240 aa)
UA08_00806CULLIN_2 domain-containing protein; Belongs to the cullin family. (799 aa)
UA08_02640RING-box protein 1. (120 aa)
Your Current Organism:
Talaromyces atroroseus
NCBI taxonomy Id: 1441469
Other names: CBS 133442, DTO 178A4, IBT 32470, KAS 3778, T. atroroseus, Talaromyces atroroseus Yilmaz, Frisvad, Houbraken & Samson, 2013
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