STRINGSTRING
UA08_09088 UA08_09088 UA08_06609 UA08_06609 UA08_05227 UA08_05227 UA08_02777 UA08_02777 UA08_00806 UA08_00806
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UA08_09088JmjC domain-containing histone demethylation protein 1. (1438 aa)
UA08_06609Cullin-associated NEDD8-dissociated protein 1, C-terminal part. (1335 aa)
UA08_05227F-box domain-containing protein. (1147 aa)
UA08_02777E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. (159 aa)
UA08_00806CULLIN_2 domain-containing protein; Belongs to the cullin family. (799 aa)
Your Current Organism:
Talaromyces atroroseus
NCBI taxonomy Id: 1441469
Other names: CBS 133442, DTO 178A4, IBT 32470, KAS 3778, T. atroroseus, Talaromyces atroroseus Yilmaz, Frisvad, Houbraken & Samson, 2013
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