STRINGSTRING
UA08_01436 UA08_01436 UA08_06971 UA08_06971 UA08_03534 UA08_03534 UA08_00027 UA08_00027 UA08_04646 UA08_04646
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UA08_01436Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (171 aa)
UA08_06971Postreplication repair E3 ubiquitin-protein ligase rad18. (423 aa)
UA08_03534DNA repair protein rad5. (1364 aa)
UA08_00027Uncharacterized protein. (2152 aa)
UA08_04646Ubiquitin-conjugating enzyme variant MMS2. (138 aa)
Your Current Organism:
Talaromyces atroroseus
NCBI taxonomy Id: 1441469
Other names: CBS 133442, DTO 178A4, IBT 32470, KAS 3778, T. atroroseus, Talaromyces atroroseus Yilmaz, Frisvad, Houbraken & Samson, 2013
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