STRINGSTRING
UA08_00705 UA08_00705 UA08_05377 UA08_05377 UA08_05227 UA08_05227 UA08_00718 UA08_00718 UA08_00640 UA08_00640 UA08_01564 UA08_01564 UA08_03967 UA08_03967 UA08_04041 UA08_04041 UA08_04103 UA08_04103 UA08_04219 UA08_04219 CIA1 CIA1 UA08_04264 UA08_04264 PAN2 PAN2 UA08_04059 UA08_04059 UA08_04308 UA08_04308 UA08_04360 UA08_04360 UA08_08415 UA08_08415 UA08_08526 UA08_08526 UA08_08386 UA08_08386 UA08_08474 UA08_08474 UA08_08472 UA08_08472 UA08_09131 UA08_09131 UA08_09095 UA08_09095 UA08_09086 UA08_09086 UA08_09161 UA08_09161 UA08_01957 UA08_01957 UA08_01917 UA08_01917 UA08_01621 UA08_01621 UA08_01395 UA08_01395 UA08_01437 UA08_01437 UA08_01792 UA08_01792 UA08_08855 UA08_08855 UA08_08231 UA08_08231 UA08_07790 UA08_07790 UA08_08348 UA08_08348 UA08_07543 UA08_07543 UA08_07205 UA08_07205 UA08_07254 UA08_07254 UA08_07212 UA08_07212 UA08_07767 UA08_07767 UA08_06582 UA08_06582 UA08_06733 UA08_06733 UA08_06089 UA08_06089 UA08_07066 UA08_07066 UA08_07189 UA08_07189 UA08_08197 UA08_08197 UA08_08317 UA08_08317 UA08_08003 UA08_08003 UA08_08640 UA08_08640 UA08_07616 UA08_07616 UA08_08638 UA08_08638 UA08_05082 UA08_05082 UA08_05192 UA08_05192 UA08_07688 UA08_07688 UA08_05117 UA08_05117 UA08_05825 UA08_05825 UA08_05269 UA08_05269 UA08_04887 UA08_04887 UA08_04508 UA08_04508 UA08_03171 UA08_03171 UA08_06123 UA08_06123 UA08_08308 UA08_08308 UA08_07084 UA08_07084 UA08_05777 UA08_05777 TIF34 TIF34 UA08_05853 UA08_05853 UA08_07670 UA08_07670 UA08_03431 UA08_03431 UA08_03779 UA08_03779 UA08_07240 UA08_07240 TRM82 TRM82 UA08_06221 UA08_06221 UA08_02605 UA08_02605 UA08_04703 UA08_04703 UA08_02978 UA08_02978 UA08_03317 UA08_03317 UA08_02283 UA08_02283 UA08_04638 UA08_04638 UA08_05913 UA08_05913 UA08_02648 UA08_02648 UA08_08667 UA08_08667 UA08_05092 UA08_05092 UA08_07894 UA08_07894 UA08_08633 UA08_08633 UA08_08127 UA08_08127 UA08_07993 UA08_07993 UA08_05098 UA08_05098 UA08_00907 UA08_00907 UA08_00035 UA08_00035 UA08_08170 UA08_08170 UA08_05066 UA08_05066 UA08_00186 UA08_00186 UA08_07892 UA08_07892 UA08_02933 UA08_02933 UA08_00334 UA08_00334 UA08_00433 UA08_00433 UA08_00190 UA08_00190 UA08_00290 UA08_00290 UA08_00819 UA08_00819 UA08_03502 UA08_03502 UA08_03490 UA08_03490 UA08_06616 UA08_06616 UA08_06522 UA08_06522 ERB1 ERB1 UA08_06575 UA08_06575 UA08_06255 UA08_06255 UA08_00690 UA08_00690 MED16 MED16 UA08_00404 UA08_00404 UA08_05125 UA08_05125 UA08_04778 UA08_04778 UA08_06080 UA08_06080 UA08_00435 UA08_00435 UA08_05482 UA08_05482 UA08_00670 UA08_00670 UA08_04777 UA08_04777 nudF nudF UA08_00108 UA08_00108 UA08_01046 UA08_01046 UA08_03010 UA08_03010 UA08_02552 UA08_02552 UA08_00257 UA08_00257 UA08_03662 UA08_03662 UA08_03530 UA08_03530 UA08_03766 UA08_03766 UA08_00182 UA08_00182 YTM1 YTM1 UA08_00499 UA08_00499 UA08_00023 UA08_00023 UA08_00441 UA08_00441
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UA08_00705WD_REPEATS_REGION domain-containing protein. (623 aa)
UA08_05377F-box domain-containing protein. (827 aa)
UA08_05227F-box domain-containing protein. (1147 aa)
UA08_00718Uncharacterized protein. (2482 aa)
UA08_00640DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (530 aa)
UA08_01564Protein sof1. (398 aa)
UA08_03967Coronin; Belongs to the WD repeat coronin family. (542 aa)
UA08_04041Lgl_C domain-containing protein. (999 aa)
UA08_04103Uncharacterized protein. (687 aa)
UA08_04219Uncharacterized protein. (947 aa)
CIA1Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. (443 aa)
UA08_04264WD_REPEATS_REGION domain-containing protein. (1376 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1821 aa)
UA08_04059Uncharacterized protein. (1312 aa)
UA08_04308Poly(A)+ RNA export protein. (462 aa)
UA08_04360Uncharacterized protein. (276 aa)
UA08_08415Putative catabolite repression protein creC. (594 aa)
UA08_08526Uncharacterized protein. (989 aa)
UA08_08386NUC153 domain-containing protein. (713 aa)
UA08_08474WD_REPEATS_REGION domain-containing protein. (996 aa)
UA08_08472Autophagy-related protein 18. (381 aa)
UA08_09131Uncharacterized protein. (1202 aa)
UA08_09095WD_REPEATS_REGION domain-containing protein. (1623 aa)
UA08_09086Uncharacterized protein. (620 aa)
UA08_09161Vegetative incompatibility protein HET-E-1. (68 aa)
UA08_01957WD_REPEATS_REGION domain-containing protein. (565 aa)
UA08_01917WD_REPEATS_REGION domain-containing protein. (674 aa)
UA08_01621Uncharacterized protein. (773 aa)
UA08_01395Uncharacterized protein. (836 aa)
UA08_01437Uncharacterized protein. (1430 aa)
UA08_01792Putative E3 ubiquitin ligase complex SCF subunit sconB. (672 aa)
UA08_08855WD_REPEATS_REGION domain-containing protein. (373 aa)
UA08_08231WD_REPEATS_REGION domain-containing protein. (540 aa)
UA08_07790Uncharacterized protein. (692 aa)
UA08_08348WD_REPEATS_REGION domain-containing protein. (1339 aa)
UA08_07543Uncharacterized protein; Belongs to the WD repeat SEC13 family. (660 aa)
UA08_07205Mitochondrial division protein 1. (665 aa)
UA08_07254Uncharacterized protein. (394 aa)
UA08_07212RING-type domain-containing protein. (2150 aa)
UA08_07767WD_REPEATS_REGION domain-containing protein. (528 aa)
UA08_06582Uncharacterized protein. (475 aa)
UA08_06733Fizzy-related protein-like protein. (588 aa)
UA08_06089HDAC_interact domain-containing protein. (2079 aa)
UA08_07066WD_REPEATS_REGION domain-containing protein. (523 aa)
UA08_07189Uncharacterized protein. (1554 aa)
UA08_08197WD_REPEATS_REGION domain-containing protein. (1188 aa)
UA08_08317WD repeat-containing protein jip5. (429 aa)
UA08_08003Uncharacterized protein. (453 aa)
UA08_08640WD_REPEATS_REGION domain-containing protein. (350 aa)
UA08_07616Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (861 aa)
UA08_08638WD_REPEATS_REGION domain-containing protein. (478 aa)
UA08_05082Uncharacterized protein. (1015 aa)
UA08_05192Uncharacterized protein. (1633 aa)
UA08_07688WD_REPEATS_REGION domain-containing protein. (1042 aa)
UA08_05117WD_REPEATS_REGION domain-containing protein. (958 aa)
UA08_05825Uncharacterized protein. (565 aa)
UA08_05269Vps8 domain-containing protein. (1573 aa)
UA08_04887WD_REPEATS_REGION domain-containing protein. (743 aa)
UA08_04508Pre-mRNA-splicing factor prp46. (448 aa)
UA08_03171Protein transport protein sec31. (1256 aa)
UA08_06123Uncharacterized protein. (1477 aa)
UA08_08308WD_REPEATS_REGION domain-containing protein. (401 aa)
UA08_07084Uncharacterized protein. (1358 aa)
UA08_05777Protein transport protein sec13; Belongs to the WD repeat SEC13 family. (305 aa)
TIF34Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (340 aa)
UA08_05853WD_REPEATS_REGION domain-containing protein. (864 aa)
UA08_07670Uncharacterized protein. (455 aa)
UA08_03431WD_REPEATS_REGION domain-containing protein. (537 aa)
UA08_03779WD_REPEATS_REGION domain-containing protein. (623 aa)
UA08_07240Uncharacterized protein. (374 aa)
TRM82tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family. (817 aa)
UA08_06221WD_REPEATS_REGION domain-containing protein. (315 aa)
UA08_02605Uncharacterized protein. (2109 aa)
UA08_04703Uncharacterized protein. (827 aa)
UA08_02978WD_REPEATS_REGION domain-containing protein. (1071 aa)
UA08_03317Pre-mRNA-splicing factor rse1. (1209 aa)
UA08_02283Uncharacterized protein. (1541 aa)
UA08_04638WD_REPEATS_REGION domain-containing protein. (333 aa)
UA08_05913Uncharacterized protein. (1480 aa)
UA08_02648WD_REPEATS_REGION domain-containing protein. (1543 aa)
UA08_08667WD_REPEATS_REGION domain-containing protein. (359 aa)
UA08_05092Uncharacterized protein. (1039 aa)
UA08_07894Uncharacterized protein. (874 aa)
UA08_08633WD_REPEATS_REGION domain-containing protein. (627 aa)
UA08_08127WD_REPEATS_REGION domain-containing protein. (579 aa)
UA08_07993Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1166 aa)
UA08_05098Uncharacterized protein. (688 aa)
UA08_00907WD_REPEATS_REGION domain-containing protein. (2401 aa)
UA08_00035WD_REPEATS_REGION domain-containing protein. (540 aa)
UA08_08170WD_REPEATS_REGION domain-containing protein. (742 aa)
UA08_05066LisH domain-containing protein. (485 aa)
UA08_00186WD_REPEATS_REGION domain-containing protein. (953 aa)
UA08_07892WD_REPEATS_REGION domain-containing protein. (583 aa)
UA08_02933Putative U3 small nucleolar RNA-associated protein 7. (543 aa)
UA08_00334Nuclear distribution protein nudF 2. (328 aa)
UA08_00433Periodic tryptophan protein 2-like protein. (885 aa)
UA08_00190Uncharacterized protein. (624 aa)
UA08_00290WD_REPEATS_REGION domain-containing protein. (344 aa)
UA08_00819WD_REPEATS_REGION domain-containing protein. (480 aa)
UA08_03502WD_REPEATS_REGION domain-containing protein. (938 aa)
UA08_03490Guanine nucleotide-binding protein subunit beta. (353 aa)
UA08_06616WD_REPEATS_REGION domain-containing protein. (496 aa)
UA08_06522ASTRA-associated protein 1. (456 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (773 aa)
UA08_06575Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology. (760 aa)
UA08_06255Uncharacterized protein. (880 aa)
UA08_00690Uncharacterized protein. (787 aa)
MED16Mediator of RNA polymerase II transcription subunit 16; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (876 aa)
UA08_00404Histone acetyltransferase type B subunit 2. (436 aa)
UA08_05125WD_REPEATS_REGION domain-containing protein. (543 aa)
UA08_04778Utp12 domain-containing protein. (853 aa)
UA08_06080WD_REPEATS_REGION domain-containing protein. (711 aa)
UA08_00435WD_REPEATS_REGION domain-containing protein. (336 aa)
UA08_05482Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (1071 aa)
UA08_00670SVP1-like protein 2. (376 aa)
UA08_04777Uncharacterized protein. (787 aa)
nudFNuclear distribution protein nudF; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. (639 aa)
UA08_00108WD_REPEATS_REGION domain-containing protein. (976 aa)
UA08_01046Uncharacterized protein. (840 aa)
UA08_03010Uncharacterized protein. (709 aa)
UA08_02552Peptidyl-prolyl cis-trans isomerase cyp15. (639 aa)
UA08_00257WD_REPEATS_REGION domain-containing protein. (726 aa)
UA08_03662Polyadenylation factor subunit 2. (593 aa)
UA08_03530WD_REPEATS_REGION domain-containing protein. (382 aa)
UA08_03766Uncharacterized protein. (1094 aa)
UA08_00182Uncharacterized protein. (502 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (487 aa)
UA08_00499Uncharacterized protein. (852 aa)
UA08_00023WD_REPEATS_REGION domain-containing protein. (767 aa)
UA08_00441Guanine nucleotide-binding protein subunit beta-like protein. (316 aa)
Your Current Organism:
Talaromyces atroroseus
NCBI taxonomy Id: 1441469
Other names: CBS 133442, DTO 178A4, IBT 32470, KAS 3778, T. atroroseus, Talaromyces atroroseus Yilmaz, Frisvad, Houbraken & Samson, 2013
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