70 items (Talaromyces atroroseus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UA08_00383	Uncharacterized protein. (330 aa)
	UA08_09481	AAA domain-containing protein. (673 aa)
	UA08_09088	JmjC domain-containing histone demethylation protein 1. (1438 aa)
	UA08_09131	Uncharacterized protein. (1202 aa)
	UA08_04140	SCF E3 ubiquitin ligase complex F-box protein grrA. (514 aa)
	UA08_04378	Uncharacterized protein. (469 aa)
	UA08_04063	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	UA08_04221	F-box domain-containing protein. (715 aa)
	UA08_04103	Uncharacterized protein. (687 aa)
	UA08_01872	Uncharacterized protein. (609 aa)
	UA08_01917	WD_REPEATS_REGION domain-containing protein. (674 aa)
	UA08_01520	BTB domain-containing protein. (237 aa)
	UA08_02035	IFRD domain-containing protein. (485 aa)
	UA08_01946	COP9 signalosome complex subunit 2. (500 aa)
	UA08_09461	Uncharacterized protein. (288 aa)
	UA08_08231	WD_REPEATS_REGION domain-containing protein. (540 aa)
	UA08_07512	Ubiquitin carboxyl-terminal hydrolase. (266 aa)
	UA08_06674	NEDD8-activating enzyme E1 catalytic subunit. (423 aa)
	UA08_06794	NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	UA08_07792	CSN8_PSD8_EIF3K domain-containing protein. (220 aa)
	UA08_07722	Uncharacterized protein. (227 aa)
	UA08_08805	Uncharacterized protein. (314 aa)
	UA08_08638	WD_REPEATS_REGION domain-containing protein. (478 aa)
	UA08_05082	Uncharacterized protein. (1015 aa)
	UA08_07664	Uncharacterized protein. (380 aa)
	UA08_05825	Uncharacterized protein. (565 aa)
	UA08_05009	ATPase_AAA_core domain-containing protein. (469 aa)
	UA08_05774	Uncharacterized protein. (1096 aa)
	UA08_05177	Uncharacterized protein. (1562 aa)
	UA08_06625	Cell division control protein 48; Belongs to the AAA ATPase family. (823 aa)
	UA08_04799	Polyubiquitin. (1035 aa)
	UA08_06369	Uncharacterized protein. (344 aa)
	UA08_03412	ATPase_AAA_core domain-containing protein. (594 aa)
	UA08_08308	WD_REPEATS_REGION domain-containing protein. (401 aa)
	UA08_07670	Uncharacterized protein. (455 aa)
	UA08_06609	Cullin-associated NEDD8-dissociated protein 1, C-terminal part. (1335 aa)
	UA08_03431	WD_REPEATS_REGION domain-containing protein. (537 aa)
	UA08_04703	Uncharacterized protein. (827 aa)
	UA08_08686	Uncharacterized protein. (280 aa)
	UA08_02691	AZUL domain-containing protein. (1362 aa)
	UA08_03036	NUC173 domain-containing protein. (1293 aa)
	UA08_04810	COP9 signalosome complex subunit 7. (338 aa)
	UA08_02397	ULP_PROTEASE domain-containing protein. (225 aa)
	UA08_07892	WD_REPEATS_REGION domain-containing protein. (583 aa)
	UA08_07180	Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family. (1431 aa)
	UA08_03051	AAA domain-containing protein. (982 aa)
	UA08_02675	Uncharacterized protein; Belongs to the AAA ATPase family. (507 aa)
	UA08_06634	Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (291 aa)
	UA08_08336	Uncharacterized protein. (925 aa)
	UA08_07245	NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. (544 aa)
	UA08_06542	CULLIN_2 domain-containing protein; Belongs to the cullin family. (865 aa)
	UA08_05714	BZIP domain-containing protein. (297 aa)
	UA08_02640	RING-box protein 1. (120 aa)
	UA08_06779	MADS-box domain-containing protein. (95 aa)
	UA08_05621	Uncharacterized protein. (857 aa)
	UA08_06032	AAA domain-containing protein. (683 aa)
	UA08_07107	COP9 signalosome complex subunit 6. (460 aa)
	UA08_07028	NACHT domain-containing protein. (828 aa)
	UA08_05102	Nuclear protein localization protein 4. (616 aa)
	UA08_03894	UBX domain-containing protein. (517 aa)
	UA08_04831	Uncharacterized protein. (194 aa)
	UA08_03090	AAA domain-containing protein. (766 aa)
	UA08_00640	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (530 aa)
	UA08_03578	Ubiquitin carboxyl-terminal hydrolase. (250 aa)
	UA08_03010	Uncharacterized protein. (709 aa)
	UA08_00257	WD_REPEATS_REGION domain-containing protein. (726 aa)
	UA08_02379	DUF1929 domain-containing protein. (513 aa)
	UA08_03920	Uncharacterized protein. (548 aa)
	UA08_03766	Uncharacterized protein. (1094 aa)
	UA08_00727	Uncharacterized protein. (681 aa)

Your Current Organism:

Talaromyces atroroseus

NCBI taxonomy Id: 1441469
Other names: CBS 133442, DTO 178A4, IBT 32470, KAS 3778, T. atroroseus, Talaromyces atroroseus Yilmaz, Frisvad, Houbraken & Samson, 2013

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
UA08_00257	UA08_00383	A0A225B3E5	A0A225B8E1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.598
UA08_00257	UA08_00640	A0A225B3E5	A0A225B1Y0	WD_REPEATS_REGION domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.765
UA08_00257	UA08_01946	A0A225B3E5	A0A1Q5QCF9	WD_REPEATS_REGION domain-containing protein.	COP9 signalosome complex subunit 2.	0.702
UA08_00257	UA08_02640	A0A225B3E5	A0A225B8V2	WD_REPEATS_REGION domain-containing protein.	RING-box protein 1.	0.883
UA08_00257	UA08_03431	A0A225B3E5	A0A225AJH6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.639
UA08_00257	UA08_04063	A0A225B3E5	A0A1Q5Q8W6	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-40S ribosomal protein S27a.	0.668
UA08_00257	UA08_04378	A0A225B3E5	A0A1Q5Q8F8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.730
UA08_00257	UA08_04799	A0A225B3E5	A0A225AGY3	WD_REPEATS_REGION domain-containing protein.	Polyubiquitin.	0.689
UA08_00257	UA08_04810	A0A225B3E5	A0A225APD3	WD_REPEATS_REGION domain-containing protein.	COP9 signalosome complex subunit 7.	0.693
UA08_00257	UA08_05177	A0A225B3E5	A0A225AGC7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.984
UA08_00257	UA08_05714	A0A225B3E5	A0A225ATH4	WD_REPEATS_REGION domain-containing protein.	BZIP domain-containing protein.	0.668
UA08_00257	UA08_05825	A0A225B3E5	A0A225AE78	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.418
UA08_00257	UA08_06369	A0A225B3E5	A0A225AH33	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.598
UA08_00257	UA08_06542	A0A225B3E5	A0A225ATD4	WD_REPEATS_REGION domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.971
UA08_00257	UA08_06674	A0A225B3E5	A0A225AC02	WD_REPEATS_REGION domain-containing protein.	NEDD8-activating enzyme E1 catalytic subunit.	0.694
UA08_00257	UA08_06779	A0A225B3E5	A0A225AU81	WD_REPEATS_REGION domain-containing protein.	MADS-box domain-containing protein.	0.598
UA08_00257	UA08_06794	A0A225B3E5	A0A225AC83	WD_REPEATS_REGION domain-containing protein.	NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.	0.677
UA08_00257	UA08_07028	A0A225B3E5	A0A225AWB5	WD_REPEATS_REGION domain-containing protein.	NACHT domain-containing protein.	0.598
UA08_00257	UA08_07107	A0A225B3E5	A0A225AW71	WD_REPEATS_REGION domain-containing protein.	COP9 signalosome complex subunit 6.	0.746
UA08_00257	UA08_07180	A0A225B3E5	A0A225AR69	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.	0.721

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