(5 nodes) MamQ/LemA, and Cellular response to cell envelope stress network (Chania multitudinisentens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AHG21470.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa)
	AHG21526.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
	AHG21765.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
	AHG21766.1	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
	AJW28960.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2481 aa)

Your Current Organism:

Chania multitudinisentens

NCBI taxonomy Id: 1441930
Other names: C. multitudinisentens RB-25, Chania multitudinisentens RB-25

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHG21470.1	AJW28960.1	Z042_19035	Z042_26275	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.522
AHG21526.1	AHG21765.1	Z042_19385	Z042_20730	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
AHG21765.1	AHG21526.1	Z042_20730	Z042_19385	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
AHG21765.1	AHG21766.1	Z042_20730	Z042_20735	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
AHG21765.1	AJW28960.1	Z042_20730	Z042_26275	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.698
AHG21766.1	AHG21765.1	Z042_20735	Z042_20730	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
AJW28960.1	AHG21470.1	Z042_26275	Z042_19035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.522
AJW28960.1	AHG21765.1	Z042_26275	Z042_20730	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.698