(5 nodes) Resolution of AP sites via the single-nucleotide replacement pathway, and DNA-directed DNA/RNA polymerase mu network (Stegastes partitus)

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Your Input:
	lig3	DNA ligase. (1014 aa)
	polb	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (338 aa)
	polm	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (508 aa)
	xrcc1	X-ray repair complementing defective repair in Chinese hamster cells 1. (578 aa)
	aplf	Uncharacterized protein. (399 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
aplf	lig3	ENSSPAP00000024976	ENSSPAP00000007598	Uncharacterized protein.	DNA ligase.	0.853
aplf	polb	ENSSPAP00000024976	ENSSPAP00000009707	Uncharacterized protein.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.891
aplf	polm	ENSSPAP00000024976	ENSSPAP00000014467	Uncharacterized protein.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.449
aplf	xrcc1	ENSSPAP00000024976	ENSSPAP00000016368	Uncharacterized protein.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.948
lig3	aplf	ENSSPAP00000007598	ENSSPAP00000024976	DNA ligase.	Uncharacterized protein.	0.853
lig3	polb	ENSSPAP00000007598	ENSSPAP00000009707	DNA ligase.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.932
lig3	polm	ENSSPAP00000007598	ENSSPAP00000014467	DNA ligase.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.792
lig3	xrcc1	ENSSPAP00000007598	ENSSPAP00000016368	DNA ligase.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.999
polb	aplf	ENSSPAP00000009707	ENSSPAP00000024976	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	Uncharacterized protein.	0.891
polb	lig3	ENSSPAP00000009707	ENSSPAP00000007598	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	DNA ligase.	0.932
polb	polm	ENSSPAP00000009707	ENSSPAP00000014467	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.800
polb	xrcc1	ENSSPAP00000009707	ENSSPAP00000016368	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.988
polm	aplf	ENSSPAP00000014467	ENSSPAP00000024976	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	Uncharacterized protein.	0.449
polm	lig3	ENSSPAP00000014467	ENSSPAP00000007598	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	DNA ligase.	0.792
polm	polb	ENSSPAP00000014467	ENSSPAP00000009707	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.800
polm	xrcc1	ENSSPAP00000014467	ENSSPAP00000016368	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	X-ray repair complementing defective repair in Chinese hamster cells 1.	0.928
xrcc1	aplf	ENSSPAP00000016368	ENSSPAP00000024976	X-ray repair complementing defective repair in Chinese hamster cells 1.	Uncharacterized protein.	0.948
xrcc1	lig3	ENSSPAP00000016368	ENSSPAP00000007598	X-ray repair complementing defective repair in Chinese hamster cells 1.	DNA ligase.	0.999
xrcc1	polb	ENSSPAP00000016368	ENSSPAP00000009707	X-ray repair complementing defective repair in Chinese hamster cells 1.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.988
xrcc1	polm	ENSSPAP00000016368	ENSSPAP00000014467	X-ray repair complementing defective repair in Chinese hamster cells 1.	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.	0.928