12 items (Stegastes partitus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RAB31	RAB31, member RAS oncogene family. (194 aa)
	gdi1	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)
	LOC103372379	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (550 aa)
	LOC103361823	Zgc:171927. (214 aa)
	rabggtb	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (331 aa)
	rab15	RAB15, member RAS oncogene family. (213 aa)
	rab1a	Uncharacterized protein. (228 aa)
	rabggta	Rab geranylgeranyltransferase subunit alpha. (583 aa)
	rab22a	RAB22A, member RAS oncogene family. (194 aa)
	LOC103373258	ZRAB1B, member RAS oncogene family a. (204 aa)
	LOC103363130	RAB15, member RAS oncogene family. (212 aa)
	gdi2	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (447 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103361823	LOC103363130	ENSSPAP00000017910	ENSSPAP00000030918	Zgc:171927.	RAB15, member RAS oncogene family.	0.765
LOC103361823	LOC103372379	ENSSPAP00000017910	ENSSPAP00000014717	Zgc:171927.	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.794
LOC103361823	LOC103373258	ENSSPAP00000017910	ENSSPAP00000030195	Zgc:171927.	ZRAB1B, member RAS oncogene family a.	0.801
LOC103361823	RAB31	ENSSPAP00000017910	ENSSPAP00000001977	Zgc:171927.	RAB31, member RAS oncogene family.	0.443
LOC103361823	gdi1	ENSSPAP00000017910	ENSSPAP00000003199	Zgc:171927.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.937
LOC103361823	gdi2	ENSSPAP00000017910	ENSSPAP00000031420	Zgc:171927.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.937
LOC103361823	rab15	ENSSPAP00000017910	ENSSPAP00000020168	Zgc:171927.	RAB15, member RAS oncogene family.	0.764
LOC103361823	rab1a	ENSSPAP00000017910	ENSSPAP00000020632	Zgc:171927.	Uncharacterized protein.	0.801
LOC103361823	rab22a	ENSSPAP00000017910	ENSSPAP00000028330	Zgc:171927.	RAB22A, member RAS oncogene family.	0.439
LOC103361823	rabggta	ENSSPAP00000017910	ENSSPAP00000021078	Zgc:171927.	Rab geranylgeranyltransferase subunit alpha.	0.796
LOC103361823	rabggtb	ENSSPAP00000017910	ENSSPAP00000018852	Zgc:171927.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.879
LOC103363130	LOC103361823	ENSSPAP00000030918	ENSSPAP00000017910	RAB15, member RAS oncogene family.	Zgc:171927.	0.765
LOC103363130	LOC103372379	ENSSPAP00000030918	ENSSPAP00000014717	RAB15, member RAS oncogene family.	Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.	0.739
LOC103363130	LOC103373258	ENSSPAP00000030918	ENSSPAP00000030195	RAB15, member RAS oncogene family.	ZRAB1B, member RAS oncogene family a.	0.765
LOC103363130	RAB31	ENSSPAP00000030918	ENSSPAP00000001977	RAB15, member RAS oncogene family.	RAB31, member RAS oncogene family.	0.494
LOC103363130	gdi1	ENSSPAP00000030918	ENSSPAP00000003199	RAB15, member RAS oncogene family.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.826
LOC103363130	gdi2	ENSSPAP00000030918	ENSSPAP00000031420	RAB15, member RAS oncogene family.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.826
LOC103363130	rab1a	ENSSPAP00000030918	ENSSPAP00000020632	RAB15, member RAS oncogene family.	Uncharacterized protein.	0.765
LOC103363130	rab22a	ENSSPAP00000030918	ENSSPAP00000028330	RAB15, member RAS oncogene family.	RAB22A, member RAS oncogene family.	0.491
LOC103363130	rabggta	ENSSPAP00000030918	ENSSPAP00000021078	RAB15, member RAS oncogene family.	Rab geranylgeranyltransferase subunit alpha.	0.643