STRINGSTRING
mmp21 mmp21 LOC103358232 LOC103358232 ENSSPAP00000003362 ENSSPAP00000003362 LOC103354448 LOC103354448 nid1 nid1 ENSSPAP00000010866 ENSSPAP00000010866 ENSSPAP00000011091 ENSSPAP00000011091 agrn agrn ENSSPAP00000013315 ENSSPAP00000013315 ENSSPAP00000016469 ENSSPAP00000016469 LOC103373135 LOC103373135 LOC103368683 LOC103368683 LOC103372513 LOC103372513 hspg2 hspg2 mmp19 mmp19 LOC103371016 LOC103371016 dmd dmd LOC103371033 LOC103371033
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmp21Matrix metallopeptidase 21. (563 aa)
LOC103358232Nidogen 2a (osteonidogen). (1543 aa)
ENSSPAP00000003362Laminin N-terminal domain-containing protein. (92 aa)
LOC103354448Peptidase S72 domain-containing protein. (910 aa)
nid1Nidogen 1a. (1202 aa)
ENSSPAP00000010866Ig-like domain-containing protein. (202 aa)
ENSSPAP00000011091Ig-like domain-containing protein. (239 aa)
agrnAgrin. (2085 aa)
ENSSPAP00000013315Dystrophin. (1198 aa)
ENSSPAP00000016469Uncharacterized protein. (107 aa)
LOC103373135Peptidase S72 domain-containing protein. (881 aa)
LOC103368683Usher syndrome 2A (autosomal recessive, mild). (3446 aa)
LOC103372513Nidogen 1b. (1215 aa)
hspg2Heparan sulfate proteoglycan 2. (3387 aa)
mmp19ZnMc domain-containing protein. (506 aa)
LOC103371016Uncharacterized protein. (218 aa)
dmdUncharacterized protein. (774 aa)
LOC103371033Dystroglycan 1. (891 aa)
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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