(16 nodes) Mixed, incl. Phospholipase A2 domain superfamily, and Fatty acid omega-hydroxylase activity network (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103361271	Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family. (527 aa)
	pla2g12a	Phospholipase A2, group XIIA. (209 aa)
	LOC103360505	Phospholipase A(2). (153 aa)
	ENSSPAP00000006653	Uncharacterized protein; Belongs to the cytochrome P450 family. (485 aa)
	LOC103354631	Zgc:152891. (667 aa)
	LOC103367413	Cytochrome P450, family 2, subfamily V, polypeptide 1; Belongs to the cytochrome P450 family. (503 aa)
	ENSSPAP00000016388	Phospholipase A2 group III. (425 aa)
	LOC103354140	Cytochrome P450, family 4, subfamily T, polypeptide 8; Belongs to the cytochrome P450 family. (512 aa)
	ENSSPAP00000020799	Uncharacterized protein; Belongs to the cytochrome P450 family. (478 aa)
	LOC103366536	Uncharacterized protein. (207 aa)
	proca1	Protein interacting with cyclin A1. (441 aa)
	pla2g4c	PLA2c domain-containing protein. (590 aa)
	LOC103357494	Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family. (516 aa)
	LOC103374398	Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family. (539 aa)
	LOC103362690	Cytochrome P450, family 3, subfamily A, polypeptide 65. (497 aa)
	LOC103362102	Arachidonate 12-lipoxygenase. (670 aa)

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000006653	ENSSPAP00000016388	ENSSPAP00000006653	ENSSPAP00000016388	Uncharacterized protein; Belongs to the cytochrome P450 family.	Phospholipase A2 group III.	0.732
ENSSPAP00000006653	ENSSPAP00000020799	ENSSPAP00000006653	ENSSPAP00000020799	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.524
ENSSPAP00000006653	LOC103354140	ENSSPAP00000006653	ENSSPAP00000016944	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450, family 4, subfamily T, polypeptide 8; Belongs to the cytochrome P450 family.	0.649
ENSSPAP00000006653	LOC103354631	ENSSPAP00000006653	ENSSPAP00000014797	Uncharacterized protein; Belongs to the cytochrome P450 family.	Zgc:152891.	0.769
ENSSPAP00000006653	LOC103357494	ENSSPAP00000006653	ENSSPAP00000026533	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family.	0.605
ENSSPAP00000006653	LOC103360505	ENSSPAP00000006653	ENSSPAP00000002720	Uncharacterized protein; Belongs to the cytochrome P450 family.	Phospholipase A(2).	0.734
ENSSPAP00000006653	LOC103361271	ENSSPAP00000006653	ENSSPAP00000001705	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.	0.855
ENSSPAP00000006653	LOC103362102	ENSSPAP00000006653	ENSSPAP00000030901	Uncharacterized protein; Belongs to the cytochrome P450 family.	Arachidonate 12-lipoxygenase.	0.847
ENSSPAP00000006653	LOC103362690	ENSSPAP00000006653	ENSSPAP00000030705	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450, family 3, subfamily A, polypeptide 65.	0.783
ENSSPAP00000006653	LOC103366536	ENSSPAP00000006653	ENSSPAP00000022812	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.799
ENSSPAP00000006653	LOC103374398	ENSSPAP00000006653	ENSSPAP00000027484	Uncharacterized protein; Belongs to the cytochrome P450 family.	Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.	0.883
ENSSPAP00000006653	proca1	ENSSPAP00000006653	ENSSPAP00000023105	Uncharacterized protein; Belongs to the cytochrome P450 family.	Protein interacting with cyclin A1.	0.851
ENSSPAP00000016388	ENSSPAP00000006653	ENSSPAP00000016388	ENSSPAP00000006653	Phospholipase A2 group III.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.732
ENSSPAP00000016388	ENSSPAP00000020799	ENSSPAP00000016388	ENSSPAP00000020799	Phospholipase A2 group III.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.651
ENSSPAP00000016388	LOC103354140	ENSSPAP00000016388	ENSSPAP00000016944	Phospholipase A2 group III.	Cytochrome P450, family 4, subfamily T, polypeptide 8; Belongs to the cytochrome P450 family.	0.765
ENSSPAP00000016388	LOC103357494	ENSSPAP00000016388	ENSSPAP00000026533	Phospholipase A2 group III.	Cytochrome P450, family 4, subfamily V, polypeptide 8; Belongs to the cytochrome P450 family.	0.725
ENSSPAP00000016388	LOC103360505	ENSSPAP00000016388	ENSSPAP00000002720	Phospholipase A2 group III.	Phospholipase A(2).	0.871
ENSSPAP00000016388	LOC103361271	ENSSPAP00000016388	ENSSPAP00000001705	Phospholipase A2 group III.	Cytochrome P450, family 2, subfamily U, polypeptide 1; Belongs to the cytochrome P450 family.	0.929
ENSSPAP00000016388	LOC103362690	ENSSPAP00000016388	ENSSPAP00000030705	Phospholipase A2 group III.	Cytochrome P450, family 3, subfamily A, polypeptide 65.	0.866
ENSSPAP00000016388	LOC103366536	ENSSPAP00000016388	ENSSPAP00000022812	Phospholipase A2 group III.	Uncharacterized protein.	0.868